Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.53■□□□□ 0.4
PCGF3Q3KNV8 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCGF3Q3KNV8 AC010980.2-201ENST00000587099 1412 ntBASIC17.53■□□□□ 0.4
PCGF3Q3KNV8 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
PCGF3Q3KNV8 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCGF3Q3KNV8 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.53■□□□□ 0.4
PCGF3Q3KNV8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCGF3Q3KNV8 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PCGF3Q3KNV8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCGF3Q3KNV8 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCGF3Q3KNV8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCGF3Q3KNV8 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCGF3Q3KNV8 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCGF3Q3KNV8 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.52■□□□□ 0.4
PCGF3Q3KNV8 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCGF3Q3KNV8 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
PCGF3Q3KNV8 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCGF3Q3KNV8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCGF3Q3KNV8 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCGF3Q3KNV8 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCGF3Q3KNV8 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PCGF3Q3KNV8 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.52■□□□□ 0.4
PCGF3Q3KNV8 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCGF3Q3KNV8 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCGF3Q3KNV8 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCGF3Q3KNV8 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCGF3Q3KNV8 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCGF3Q3KNV8 MIPEPP3-201ENST00000412105 444 ntBASIC17.52■□□□□ 0.4
PCGF3Q3KNV8 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.52■□□□□ 0.4
PCGF3Q3KNV8 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.52■□□□□ 0.4
PCGF3Q3KNV8 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.52■□□□□ 0.4
PCGF3Q3KNV8 AC092118.2-201ENST00000613495 667 ntBASIC17.52■□□□□ 0.4
PCGF3Q3KNV8 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.52■□□□□ 0.4
PCGF3Q3KNV8 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.52■□□□□ 0.4
PCGF3Q3KNV8 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.52■□□□□ 0.4
PCGF3Q3KNV8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PCGF3Q3KNV8 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCGF3Q3KNV8 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCGF3Q3KNV8 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCGF3Q3KNV8 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.51■□□□□ 0.39
PCGF3Q3KNV8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCGF3Q3KNV8 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
PCGF3Q3KNV8 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.51■□□□□ 0.39
PCGF3Q3KNV8 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCGF3Q3KNV8 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
PCGF3Q3KNV8 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCGF3Q3KNV8 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCGF3Q3KNV8 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCGF3Q3KNV8 AC069152.1-201ENST00000438030 544 ntBASIC17.51■□□□□ 0.39
PCGF3Q3KNV8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.51■□□□□ 0.39
PCGF3Q3KNV8 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.51■□□□□ 0.39
PCGF3Q3KNV8 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.51■□□□□ 0.39
PCGF3Q3KNV8 AL138781.1-201ENST00000566567 1274 ntBASIC17.51■□□□□ 0.39
PCGF3Q3KNV8 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.51■□□□□ 0.39
PCGF3Q3KNV8 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PCGF3Q3KNV8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCGF3Q3KNV8 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
PCGF3Q3KNV8 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.51■□□□□ 0.39
PCGF3Q3KNV8 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCGF3Q3KNV8 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCGF3Q3KNV8 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCGF3Q3KNV8 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCGF3Q3KNV8 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCGF3Q3KNV8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.5■□□□□ 0.39
PCGF3Q3KNV8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCGF3Q3KNV8 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCGF3Q3KNV8 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.5■□□□□ 0.39
PCGF3Q3KNV8 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
PCGF3Q3KNV8 MCRIP2P1-201ENST00000394346 511 ntBASIC17.5■□□□□ 0.39
PCGF3Q3KNV8 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.5■□□□□ 0.39
PCGF3Q3KNV8 BX276092.2-201ENST00000417668 665 ntBASIC17.5■□□□□ 0.39
PCGF3Q3KNV8 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.5■□□□□ 0.39
PCGF3Q3KNV8 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.5■□□□□ 0.39
PCGF3Q3KNV8 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.5■□□□□ 0.39
PCGF3Q3KNV8 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.5■□□□□ 0.39
PCGF3Q3KNV8 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.5■□□□□ 0.39
PCGF3Q3KNV8 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.5■□□□□ 0.39
PCGF3Q3KNV8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PCGF3Q3KNV8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCGF3Q3KNV8 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PCGF3Q3KNV8 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.5■□□□□ 0.39
PCGF3Q3KNV8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCGF3Q3KNV8 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCGF3Q3KNV8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCGF3Q3KNV8 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCGF3Q3KNV8 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PCGF3Q3KNV8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PCGF3Q3KNV8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
PCGF3Q3KNV8 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCGF3Q3KNV8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.49■□□□□ 0.39
PCGF3Q3KNV8 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCGF3Q3KNV8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCGF3Q3KNV8 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PCGF3Q3KNV8 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCGF3Q3KNV8 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCGF3Q3KNV8 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PCGF3Q3KNV8 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PCGF3Q3KNV8 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCGF3Q3KNV8 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCGF3Q3KNV8 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms