Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SKP1P63208 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
SKP1P63208 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SKP1P63208 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SKP1P63208 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SKP1P63208 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SKP1P63208 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.83■□□□□ 0.61
SKP1P63208 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SKP1P63208 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.83■□□□□ 0.61
SKP1P63208 PHGDH-210ENST00000641115 1638 ntBASIC18.83■□□□□ 0.61
SKP1P63208 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.83■□□□□ 0.6
SKP1P63208 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SKP1P63208 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.83■□□□□ 0.6
SKP1P63208 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SKP1P63208 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SKP1P63208 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.83■□□□□ 0.6
SKP1P63208 AC069544.1-201ENST00000609399 999 ntBASIC18.83■□□□□ 0.6
SKP1P63208 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
SKP1P63208 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.83■□□□□ 0.6
SKP1P63208 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
SKP1P63208 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SKP1P63208 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SKP1P63208 AL162377.1-201ENST00000618844 1793 ntBASIC18.83■□□□□ 0.6
SKP1P63208 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SKP1P63208 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SKP1P63208 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SKP1P63208 AL512408.1-201ENST00000569378 2000 ntBASIC18.83■□□□□ 0.6
SKP1P63208 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.83■□□□□ 0.6
SKP1P63208 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SKP1P63208 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SKP1P63208 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.82■□□□□ 0.6
SKP1P63208 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SKP1P63208 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SKP1P63208 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SKP1P63208 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.82■□□□□ 0.6
SKP1P63208 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SKP1P63208 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.82■□□□□ 0.6
SKP1P63208 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.82■□□□□ 0.6
SKP1P63208 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
SKP1P63208 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SKP1P63208 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SKP1P63208 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SKP1P63208 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
SKP1P63208 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
SKP1P63208 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SKP1P63208 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SKP1P63208 LINC01006-201ENST00000333319 2292 ntBASIC18.81■□□□□ 0.6
SKP1P63208 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SKP1P63208 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.81■□□□□ 0.6
SKP1P63208 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SKP1P63208 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SKP1P63208 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.81■□□□□ 0.6
SKP1P63208 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SKP1P63208 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.81■□□□□ 0.6
SKP1P63208 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SKP1P63208 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SKP1P63208 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.81■□□□□ 0.6
SKP1P63208 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.81■□□□□ 0.6
SKP1P63208 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.81■□□□□ 0.6
SKP1P63208 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SKP1P63208 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SKP1P63208 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SKP1P63208 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.81■□□□□ 0.6
SKP1P63208 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.81■□□□□ 0.6
SKP1P63208 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SKP1P63208 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SKP1P63208 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.81■□□□□ 0.6
SKP1P63208 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SKP1P63208 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SKP1P63208 AP001271.2-201ENST00000624018 1556 ntBASIC18.81■□□□□ 0.6
SKP1P63208 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SKP1P63208 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SKP1P63208 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SKP1P63208 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SKP1P63208 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SKP1P63208 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SKP1P63208 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SKP1P63208 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
SKP1P63208 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.8■□□□□ 0.6
SKP1P63208 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SKP1P63208 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SKP1P63208 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SKP1P63208 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
SKP1P63208 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SKP1P63208 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.8■□□□□ 0.6
SKP1P63208 AC128676.1-201ENST00000454392 318 ntBASIC18.8■□□□□ 0.6
SKP1P63208 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.8■□□□□ 0.6
SKP1P63208 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SKP1P63208 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.8■□□□□ 0.6
SKP1P63208 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SKP1P63208 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SKP1P63208 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SKP1P63208 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.8■□□□□ 0.6
SKP1P63208 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SKP1P63208 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.8■□□□□ 0.6
SKP1P63208 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SKP1P63208 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.8■□□□□ 0.6
SKP1P63208 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.8■□□□□ 0.6
SKP1P63208 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SKP1P63208 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms