Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNRPEP62304 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNRPEP62304 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNRPEP62304 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNRPEP62304 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SNRPEP62304 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC15.3■□□□□ 0.04
SNRPEP62304 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNRPEP62304 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SNRPEP62304 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SNRPEP62304 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC15.3■□□□□ 0.04
SNRPEP62304 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SNRPEP62304 AC126177.7-201ENST00000547904 679 ntBASIC15.3■□□□□ 0.04
SNRPEP62304 MIR3960-201ENST00000583311 91 ntBASIC15.3■□□□□ 0.04
SNRPEP62304 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SNRPEP62304 FER1L4-210ENST00000615531 5998 ntBASIC15.3■□□□□ 0.04
SNRPEP62304 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNRPEP62304 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNRPEP62304 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNRPEP62304 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
SNRPEP62304 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.29■□□□□ 0.04
SNRPEP62304 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.29■□□□□ 0.04
SNRPEP62304 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNRPEP62304 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.29■□□□□ 0.04
SNRPEP62304 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNRPEP62304 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.29■□□□□ 0.04
SNRPEP62304 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNRPEP62304 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC15.29■□□□□ 0.04
SNRPEP62304 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNRPEP62304 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNRPEP62304 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNRPEP62304 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNRPEP62304 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SNRPEP62304 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNRPEP62304 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
SNRPEP62304 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNRPEP62304 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SNRPEP62304 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNRPEP62304 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNRPEP62304 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.29■□□□□ 0.04
SNRPEP62304 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNRPEP62304 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.29■□□□□ 0.04
SNRPEP62304 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.29■□□□□ 0.04
SNRPEP62304 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15.29■□□□□ 0.04
SNRPEP62304 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNRPEP62304 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNRPEP62304 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC15.29■□□□□ 0.04
SNRPEP62304 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
SNRPEP62304 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNRPEP62304 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SNRPEP62304 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
SNRPEP62304 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SNRPEP62304 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNRPEP62304 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.29■□□□□ 0.04
SNRPEP62304 TMEM179-206ENST00000616017 1645 ntBASIC15.28■□□□□ 0.04
SNRPEP62304 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SNRPEP62304 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.28■□□□□ 0.04
SNRPEP62304 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNRPEP62304 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SNRPEP62304 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC15.28■□□□□ 0.04
SNRPEP62304 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC15.28■□□□□ 0.04
SNRPEP62304 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.28■□□□□ 0.04
SNRPEP62304 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNRPEP62304 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNRPEP62304 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNRPEP62304 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SNRPEP62304 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNRPEP62304 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SNRPEP62304 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.28■□□□□ 0.04
SNRPEP62304 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SNRPEP62304 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SNRPEP62304 H19-201ENST00000411754 1788 ntTSL 5 BASIC15.28■□□□□ 0.04
SNRPEP62304 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNRPEP62304 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC15.28■□□□□ 0.04
SNRPEP62304 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNRPEP62304 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNRPEP62304 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SNRPEP62304 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SNRPEP62304 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SNRPEP62304 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC15.27■□□□□ 0.04
SNRPEP62304 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNRPEP62304 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SNRPEP62304 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.27■□□□□ 0.04
SNRPEP62304 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNRPEP62304 WIZP1-201ENST00000531444 2299 ntBASIC15.27■□□□□ 0.04
SNRPEP62304 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNRPEP62304 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC15.27■□□□□ 0.04
SNRPEP62304 LINC01529-204ENST00000636474 1715 ntBASIC15.27■□□□□ 0.04
SNRPEP62304 HLA-V-202ENST00000446817 847 ntBASIC15.27■□□□□ 0.04
SNRPEP62304 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC15.27■□□□□ 0.04
SNRPEP62304 SSSCA1-AS1-201ENST00000567594 614 ntBASIC15.27■□□□□ 0.04
SNRPEP62304 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SNRPEP62304 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.27■□□□□ 0.03
SNRPEP62304 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC15.27■□□□□ 0.03
SNRPEP62304 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC15.27■□□□□ 0.03
SNRPEP62304 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
SNRPEP62304 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
SNRPEP62304 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNRPEP62304 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNRPEP62304 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SNRPEP62304 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms