Protein–RNA interactions for Protein: P62249

RPS16, 40S ribosomal protein S16, humanhuman

Known RBP Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS16P62249 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
RPS16P62249 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS16P62249 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RPS16P62249 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS16P62249 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS16P62249 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RPS16P62249 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RPS16P62249 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS16P62249 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS16P62249 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS16P62249 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.3■□□□□ 0.2
RPS16P62249 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS16P62249 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RPS16P62249 AC068338.2-201ENST00000563278 1430 ntBASIC16.3■□□□□ 0.2
RPS16P62249 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.3■□□□□ 0.2
RPS16P62249 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS16P62249 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RPS16P62249 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RPS16P62249 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RPS16P62249 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS16P62249 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS16P62249 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS16P62249 MIR935-201ENST00000401179 91 ntBASIC16.3■□□□□ 0.2
RPS16P62249 RARRES2P4-201ENST00000514074 484 ntBASIC16.3■□□□□ 0.2
RPS16P62249 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.3■□□□□ 0.2
RPS16P62249 AC069236.1-201ENST00000604339 616 ntBASIC16.3■□□□□ 0.2
RPS16P62249 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.3■□□□□ 0.2
RPS16P62249 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS16P62249 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
RPS16P62249 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS16P62249 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.3■□□□□ 0.2
RPS16P62249 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS16P62249 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
RPS16P62249 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS16P62249 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS16P62249 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.29■□□□□ 0.2
RPS16P62249 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPS16P62249 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS16P62249 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS16P62249 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS16P62249 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RPS16P62249 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS16P62249 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RPS16P62249 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS16P62249 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
RPS16P62249 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS16P62249 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS16P62249 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPS16P62249 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.29■□□□□ 0.2
RPS16P62249 CNN2P6-201ENST00000439038 900 ntBASIC16.29■□□□□ 0.2
RPS16P62249 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.29■□□□□ 0.2
RPS16P62249 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.29■□□□□ 0.2
RPS16P62249 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.29■□□□□ 0.2
RPS16P62249 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPS16P62249 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS16P62249 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.29■□□□□ 0.2
RPS16P62249 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS16P62249 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS16P62249 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS16P62249 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPS16P62249 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RPS16P62249 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
RPS16P62249 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS16P62249 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS16P62249 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS16P62249 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPS16P62249 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPS16P62249 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.28■□□□□ 0.2
RPS16P62249 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS16P62249 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.28■□□□□ 0.2
RPS16P62249 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPS16P62249 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS16P62249 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.28■□□□□ 0.2
RPS16P62249 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RPS16P62249 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS16P62249 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RPS16P62249 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS16P62249 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS16P62249 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RPS16P62249 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS16P62249 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS16P62249 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS16P62249 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPS16P62249 MCRIP2P1-201ENST00000394346 511 ntBASIC16.28■□□□□ 0.2
RPS16P62249 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPS16P62249 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPS16P62249 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.28■□□□□ 0.2
RPS16P62249 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.28■□□□□ 0.2
RPS16P62249 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS16P62249 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS16P62249 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS16P62249 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS16P62249 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS16P62249 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS16P62249 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPS16P62249 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS16P62249 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS16P62249 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
RPS16P62249 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.28■□□□□ 0.2
RPS16P62249 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms