Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CXCR4P61073 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CXCR4P61073 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CXCR4P61073 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CXCR4P61073 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CXCR4P61073 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CXCR4P61073 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CXCR4P61073 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.07■□□□□ 0.48
CXCR4P61073 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
CXCR4P61073 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.07■□□□□ 0.48
CXCR4P61073 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.07■□□□□ 0.48
CXCR4P61073 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.07■□□□□ 0.48
CXCR4P61073 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.07■□□□□ 0.48
CXCR4P61073 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CXCR4P61073 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CXCR4P61073 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.07■□□□□ 0.48
CXCR4P61073 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CXCR4P61073 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CXCR4P61073 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CXCR4P61073 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CXCR4P61073 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CXCR4P61073 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CXCR4P61073 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.06■□□□□ 0.48
CXCR4P61073 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CXCR4P61073 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CXCR4P61073 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CXCR4P61073 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CXCR4P61073 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CXCR4P61073 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CXCR4P61073 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CXCR4P61073 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.06■□□□□ 0.48
CXCR4P61073 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CXCR4P61073 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CXCR4P61073 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CXCR4P61073 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.06■□□□□ 0.48
CXCR4P61073 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CXCR4P61073 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.06■□□□□ 0.48
CXCR4P61073 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.06■□□□□ 0.48
CXCR4P61073 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.06■□□□□ 0.48
CXCR4P61073 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.06■□□□□ 0.48
CXCR4P61073 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CXCR4P61073 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CXCR4P61073 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CXCR4P61073 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CXCR4P61073 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CXCR4P61073 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
CXCR4P61073 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CXCR4P61073 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
CXCR4P61073 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
CXCR4P61073 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.05■□□□□ 0.48
CXCR4P61073 AC007613.1-201ENST00000572811 2597 ntBASIC18.05■□□□□ 0.48
CXCR4P61073 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
CXCR4P61073 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CXCR4P61073 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CXCR4P61073 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.05■□□□□ 0.48
CXCR4P61073 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CXCR4P61073 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CXCR4P61073 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CXCR4P61073 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CXCR4P61073 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
CXCR4P61073 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CXCR4P61073 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.05■□□□□ 0.48
CXCR4P61073 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CXCR4P61073 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.05■□□□□ 0.48
CXCR4P61073 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.05■□□□□ 0.48
CXCR4P61073 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CXCR4P61073 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CXCR4P61073 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.05■□□□□ 0.48
CXCR4P61073 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CXCR4P61073 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CXCR4P61073 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CXCR4P61073 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CXCR4P61073 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CXCR4P61073 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
CXCR4P61073 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.04■□□□□ 0.48
CXCR4P61073 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CXCR4P61073 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CXCR4P61073 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CXCR4P61073 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.04■□□□□ 0.48
CXCR4P61073 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CXCR4P61073 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CXCR4P61073 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CXCR4P61073 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CXCR4P61073 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CXCR4P61073 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CXCR4P61073 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CXCR4P61073 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CXCR4P61073 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.04■□□□□ 0.48
CXCR4P61073 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CXCR4P61073 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CXCR4P61073 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.04■□□□□ 0.48
CXCR4P61073 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CXCR4P61073 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CXCR4P61073 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CXCR4P61073 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CXCR4P61073 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.04■□□□□ 0.48
CXCR4P61073 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CXCR4P61073 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CXCR4P61073 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CXCR4P61073 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms