Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN2P57739 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
CLDN2P57739 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CLDN2P57739 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CLDN2P57739 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN2P57739 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN2P57739 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN2P57739 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CLDN2P57739 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN2P57739 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN2P57739 AP002982.1-201ENST00000492365 877 ntBASIC19.63■□□□□ 0.73
CLDN2P57739 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.63■□□□□ 0.73
CLDN2P57739 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CLDN2P57739 AC073195.1-201ENST00000607241 877 ntBASIC19.63■□□□□ 0.73
CLDN2P57739 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN2P57739 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CLDN2P57739 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.63■□□□□ 0.73
CLDN2P57739 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.63■□□□□ 0.73
CLDN2P57739 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN2P57739 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.63■□□□□ 0.73
CLDN2P57739 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.63■□□□□ 0.73
CLDN2P57739 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN2P57739 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN2P57739 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN2P57739 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN2P57739 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN2P57739 KRT16P6-202ENST00000425692 1426 ntBASIC19.62■□□□□ 0.73
CLDN2P57739 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN2P57739 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN2P57739 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN2P57739 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN2P57739 AC087499.1-201ENST00000418141 1075 ntBASIC19.62■□□□□ 0.73
CLDN2P57739 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.62■□□□□ 0.73
CLDN2P57739 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.62■□□□□ 0.73
CLDN2P57739 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN2P57739 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.62■□□□□ 0.73
CLDN2P57739 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN2P57739 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN2P57739 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.62■□□□□ 0.73
CLDN2P57739 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.62■□□□□ 0.73
CLDN2P57739 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN2P57739 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN2P57739 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN2P57739 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.61■□□□□ 0.73
CLDN2P57739 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN2P57739 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN2P57739 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.61■□□□□ 0.73
CLDN2P57739 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN2P57739 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.61■□□□□ 0.73
CLDN2P57739 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN2P57739 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN2P57739 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CLDN2P57739 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.61■□□□□ 0.73
CLDN2P57739 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN2P57739 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN2P57739 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.61■□□□□ 0.73
CLDN2P57739 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.61■□□□□ 0.73
CLDN2P57739 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CLDN2P57739 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
CLDN2P57739 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.61■□□□□ 0.73
CLDN2P57739 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.61■□□□□ 0.73
CLDN2P57739 LINC01023-201ENST00000606054 436 ntBASIC19.61■□□□□ 0.73
CLDN2P57739 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.61■□□□□ 0.73
CLDN2P57739 AC133561.5-201ENST00000635547 218 ntBASIC19.61■□□□□ 0.73
CLDN2P57739 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN2P57739 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN2P57739 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN2P57739 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN2P57739 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.61■□□□□ 0.73
CLDN2P57739 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN2P57739 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN2P57739 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN2P57739 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN2P57739 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.61■□□□□ 0.73
CLDN2P57739 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN2P57739 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN2P57739 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN2P57739 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN2P57739 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN2P57739 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN2P57739 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.6■□□□□ 0.73
CLDN2P57739 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN2P57739 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.6■□□□□ 0.73
CLDN2P57739 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CLDN2P57739 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN2P57739 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN2P57739 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.6■□□□□ 0.73
CLDN2P57739 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.6■□□□□ 0.73
CLDN2P57739 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN2P57739 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.6■□□□□ 0.73
CLDN2P57739 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN2P57739 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.6■□□□□ 0.73
CLDN2P57739 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN2P57739 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN2P57739 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
CLDN2P57739 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN2P57739 AC116351.2-201ENST00000606540 1585 ntBASIC19.6■□□□□ 0.73
CLDN2P57739 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
CLDN2P57739 AP006587.1-201ENST00000534129 1502 ntBASIC19.6■□□□□ 0.73
CLDN2P57739 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms