Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.87■□□□□ 0.61
CLDN8P56748 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.87■□□□□ 0.61
CLDN8P56748 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.87■□□□□ 0.61
CLDN8P56748 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.87■□□□□ 0.61
CLDN8P56748 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN8P56748 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.87■□□□□ 0.61
CLDN8P56748 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.87■□□□□ 0.61
CLDN8P56748 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN8P56748 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.86■□□□□ 0.61
CLDN8P56748 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.86■□□□□ 0.61
CLDN8P56748 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CLDN8P56748 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN8P56748 Z82202.1-201ENST00000623446 1880 ntBASIC18.86■□□□□ 0.61
CLDN8P56748 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN8P56748 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN8P56748 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN8P56748 PHGDH-210ENST00000641115 1638 ntBASIC18.86■□□□□ 0.61
CLDN8P56748 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN8P56748 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN8P56748 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
CLDN8P56748 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
CLDN8P56748 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN8P56748 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN8P56748 AL512625.2-201ENST00000417533 625 ntBASIC18.86■□□□□ 0.61
CLDN8P56748 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN8P56748 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.86■□□□□ 0.61
CLDN8P56748 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.86■□□□□ 0.61
CLDN8P56748 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN8P56748 AC098818.2-201ENST00000564925 2320 ntBASIC18.86■□□□□ 0.61
CLDN8P56748 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN8P56748 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN8P56748 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN8P56748 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN8P56748 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN8P56748 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
CLDN8P56748 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.85■□□□□ 0.61
CLDN8P56748 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN8P56748 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN8P56748 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN8P56748 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CLDN8P56748 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN8P56748 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CLDN8P56748 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN8P56748 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN8P56748 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN8P56748 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN8P56748 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CLDN8P56748 RARRES2P6-201ENST00000567333 442 ntBASIC18.85■□□□□ 0.61
CLDN8P56748 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.85■□□□□ 0.61
CLDN8P56748 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.85■□□□□ 0.61
CLDN8P56748 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CLDN8P56748 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN8P56748 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN8P56748 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN8P56748 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.85■□□□□ 0.61
CLDN8P56748 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CLDN8P56748 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN8P56748 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN8P56748 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN8P56748 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN8P56748 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN8P56748 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN8P56748 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN8P56748 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN8P56748 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.84■□□□□ 0.61
CLDN8P56748 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN8P56748 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN8P56748 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN8P56748 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN8P56748 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.84■□□□□ 0.61
CLDN8P56748 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CLDN8P56748 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.84■□□□□ 0.61
CLDN8P56748 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN8P56748 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.84■□□□□ 0.61
CLDN8P56748 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN8P56748 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.83■□□□□ 0.61
CLDN8P56748 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN8P56748 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.83■□□□□ 0.61
CLDN8P56748 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN8P56748 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN8P56748 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN8P56748 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN8P56748 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN8P56748 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CLDN8P56748 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN8P56748 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.83■□□□□ 0.6
CLDN8P56748 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.83■□□□□ 0.6
CLDN8P56748 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.83■□□□□ 0.6
CLDN8P56748 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.83■□□□□ 0.6
CLDN8P56748 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.83■□□□□ 0.6
CLDN8P56748 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.83■□□□□ 0.6
CLDN8P56748 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.83■□□□□ 0.6
CLDN8P56748 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.83■□□□□ 0.6
CLDN8P56748 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN8P56748 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.83■□□□□ 0.6
CLDN8P56748 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN8P56748 KRT17P1-201ENST00000399211 1546 ntBASIC18.83■□□□□ 0.6
CLDN8P56748 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN8P56748 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN8P56748 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms