Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
KCNQ4P56696 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
KCNQ4P56696 AP000692.2-201ENST00000608391 879 ntBASIC25.42■■□□□ 1.66
KCNQ4P56696 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
KCNQ4P56696 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
KCNQ4P56696 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC25.42■■□□□ 1.66
KCNQ4P56696 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC25.42■■□□□ 1.66
KCNQ4P56696 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC25.42■■□□□ 1.66
KCNQ4P56696 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC25.42■■□□□ 1.66
KCNQ4P56696 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
KCNQ4P56696 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
KCNQ4P56696 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC25.41■■□□□ 1.66
KCNQ4P56696 RCC2P6-201ENST00000526625 1557 ntBASIC25.41■■□□□ 1.66
KCNQ4P56696 KRT8P17-201ENST00000453110 1448 ntBASIC25.41■■□□□ 1.66
KCNQ4P56696 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
KCNQ4P56696 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
KCNQ4P56696 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
KCNQ4P56696 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
KCNQ4P56696 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC25.41■■□□□ 1.66
KCNQ4P56696 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC25.41■■□□□ 1.66
KCNQ4P56696 AC092647.4-201ENST00000457211 535 ntBASIC25.41■■□□□ 1.66
KCNQ4P56696 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC25.41■■□□□ 1.66
KCNQ4P56696 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC25.41■■□□□ 1.66
KCNQ4P56696 AC131212.4-201ENST00000623606 975 ntBASIC25.41■■□□□ 1.66
KCNQ4P56696 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC25.41■■□□□ 1.66
KCNQ4P56696 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
KCNQ4P56696 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
KCNQ4P56696 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC25.4■■□□□ 1.66
KCNQ4P56696 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
KCNQ4P56696 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
KCNQ4P56696 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
KCNQ4P56696 AL024507.2-201ENST00000606070 2574 ntBASIC25.4■■□□□ 1.66
KCNQ4P56696 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
KCNQ4P56696 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
KCNQ4P56696 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
KCNQ4P56696 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
KCNQ4P56696 BET1L-202ENST00000332865 533 ntTSL 5 BASIC25.4■■□□□ 1.66
KCNQ4P56696 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
KCNQ4P56696 COX11P1-201ENST00000489116 835 ntBASIC25.4■■□□□ 1.66
KCNQ4P56696 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
KCNQ4P56696 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC25.4■■□□□ 1.66
KCNQ4P56696 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC25.4■■□□□ 1.66
KCNQ4P56696 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC25.4■■□□□ 1.66
KCNQ4P56696 AC011298.2-201ENST00000617989 482 ntBASIC25.4■■□□□ 1.66
KCNQ4P56696 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC25.4■■□□□ 1.66
KCNQ4P56696 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
KCNQ4P56696 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
KCNQ4P56696 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
KCNQ4P56696 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC25.4■■□□□ 1.66
KCNQ4P56696 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC25.4■■□□□ 1.66
KCNQ4P56696 AC121338.2-201ENST00000622535 1744 ntBASIC25.4■■□□□ 1.66
KCNQ4P56696 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC25.39■■□□□ 1.66
KCNQ4P56696 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC25.39■■□□□ 1.66
KCNQ4P56696 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
KCNQ4P56696 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
KCNQ4P56696 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
KCNQ4P56696 AL450487.1-201ENST00000426799 995 ntBASIC25.39■■□□□ 1.66
KCNQ4P56696 MFAP1P1-201ENST00000442257 1255 ntBASIC25.39■■□□□ 1.66
KCNQ4P56696 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
KCNQ4P56696 CYGB-204ENST00000589342 815 ntTSL 3 BASIC25.39■■□□□ 1.66
KCNQ4P56696 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC25.39■■□□□ 1.66
KCNQ4P56696 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC25.39■■□□□ 1.65
KCNQ4P56696 IER3-202ENST00000376377 1350 ntBASIC25.39■■□□□ 1.65
KCNQ4P56696 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
KCNQ4P56696 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.65
KCNQ4P56696 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
KCNQ4P56696 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
KCNQ4P56696 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC25.38■■□□□ 1.65
KCNQ4P56696 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
KCNQ4P56696 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
KCNQ4P56696 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
KCNQ4P56696 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC25.38■■□□□ 1.65
KCNQ4P56696 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
KCNQ4P56696 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
KCNQ4P56696 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
KCNQ4P56696 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
KCNQ4P56696 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC25.38■■□□□ 1.65
KCNQ4P56696 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC25.38■■□□□ 1.65
KCNQ4P56696 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC25.38■■□□□ 1.65
KCNQ4P56696 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC25.38■■□□□ 1.65
KCNQ4P56696 DBP-204ENST00000599385 709 ntTSL 3 BASIC25.38■■□□□ 1.65
KCNQ4P56696 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC25.38■■□□□ 1.65
KCNQ4P56696 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
KCNQ4P56696 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC25.38■■□□□ 1.65
KCNQ4P56696 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC25.38■■□□□ 1.65
KCNQ4P56696 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC25.38■■□□□ 1.65
KCNQ4P56696 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
KCNQ4P56696 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
KCNQ4P56696 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
KCNQ4P56696 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC25.37■■□□□ 1.65
KCNQ4P56696 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC25.37■■□□□ 1.65
KCNQ4P56696 AC007663.1-201ENST00000438948 1240 ntBASIC25.37■■□□□ 1.65
KCNQ4P56696 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
KCNQ4P56696 FAM207BP-201ENST00000447172 505 ntBASIC25.37■■□□□ 1.65
KCNQ4P56696 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
KCNQ4P56696 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC25.37■■□□□ 1.65
KCNQ4P56696 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC25.37■■□□□ 1.65
KCNQ4P56696 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC25.37■■□□□ 1.65
KCNQ4P56696 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
KCNQ4P56696 AC141257.4-201ENST00000634557 245 ntBASIC25.37■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms