Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.22■□□□□ 0.99
CDH8P55286 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CDH8P55286 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH8P55286 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.21■□□□□ 0.99
CDH8P55286 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH8P55286 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH8P55286 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.21■□□□□ 0.99
CDH8P55286 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH8P55286 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.21■□□□□ 0.99
CDH8P55286 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.21■□□□□ 0.99
CDH8P55286 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.21■□□□□ 0.99
CDH8P55286 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CDH8P55286 MTDHP1-201ENST00000605323 784 ntBASIC21.21■□□□□ 0.99
CDH8P55286 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.21■□□□□ 0.99
CDH8P55286 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDH8P55286 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH8P55286 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.21■□□□□ 0.99
CDH8P55286 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH8P55286 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.21■□□□□ 0.99
CDH8P55286 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDH8P55286 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDH8P55286 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
CDH8P55286 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CDH8P55286 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH8P55286 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH8P55286 PHGDH-210ENST00000641115 1638 ntBASIC21.2■□□□□ 0.98
CDH8P55286 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDH8P55286 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.2■□□□□ 0.98
CDH8P55286 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.2■□□□□ 0.98
CDH8P55286 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.2■□□□□ 0.98
CDH8P55286 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.2■□□□□ 0.98
CDH8P55286 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH8P55286 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH8P55286 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH8P55286 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDH8P55286 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDH8P55286 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.2■□□□□ 0.98
CDH8P55286 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
CDH8P55286 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.2■□□□□ 0.98
CDH8P55286 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH8P55286 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.19■□□□□ 0.98
CDH8P55286 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
CDH8P55286 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH8P55286 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDH8P55286 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH8P55286 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH8P55286 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.19■□□□□ 0.98
CDH8P55286 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CDH8P55286 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.19■□□□□ 0.98
CDH8P55286 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
CDH8P55286 RN7SL471P-201ENST00000580476 299 ntBASIC21.19■□□□□ 0.98
CDH8P55286 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH8P55286 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH8P55286 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CDH8P55286 AC018553.1-201ENST00000616682 1458 ntBASIC21.19■□□□□ 0.98
CDH8P55286 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH8P55286 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH8P55286 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDH8P55286 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.18■□□□□ 0.98
CDH8P55286 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CDH8P55286 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH8P55286 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH8P55286 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.18■□□□□ 0.98
CDH8P55286 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDH8P55286 AC098590.1-201ENST00000468126 897 ntBASIC21.18■□□□□ 0.98
CDH8P55286 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDH8P55286 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.18■□□□□ 0.98
CDH8P55286 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CDH8P55286 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.18■□□□□ 0.98
CDH8P55286 AL023875.1-201ENST00000640777 796 ntBASIC21.18■□□□□ 0.98
CDH8P55286 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDH8P55286 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH8P55286 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH8P55286 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDH8P55286 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDH8P55286 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.17■□□□□ 0.98
CDH8P55286 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CDH8P55286 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.17■□□□□ 0.98
CDH8P55286 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH8P55286 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDH8P55286 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH8P55286 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.17■□□□□ 0.98
CDH8P55286 AL121829.2-201ENST00000620908 328 ntBASIC21.17■□□□□ 0.98
CDH8P55286 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH8P55286 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH8P55286 AC116351.2-201ENST00000606540 1585 ntBASIC21.17■□□□□ 0.98
CDH8P55286 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CDH8P55286 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.17■□□□□ 0.98
CDH8P55286 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH8P55286 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.17■□□□□ 0.98
CDH8P55286 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH8P55286 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.17■□□□□ 0.98
CDH8P55286 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDH8P55286 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CDH8P55286 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH8P55286 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
CDH8P55286 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH8P55286 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CDH8P55286 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH8P55286 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms