Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
NCKAP1LP55160 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.78■■□□□ 1.08
NCKAP1LP55160 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NCKAP1LP55160 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NCKAP1LP55160 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NCKAP1LP55160 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NCKAP1LP55160 AC009237.14-201ENST00000609975 1594 ntBASIC21.78■■□□□ 1.08
NCKAP1LP55160 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.78■■□□□ 1.08
NCKAP1LP55160 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
NCKAP1LP55160 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.78■■□□□ 1.08
NCKAP1LP55160 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
NCKAP1LP55160 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NCKAP1LP55160 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NCKAP1LP55160 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NCKAP1LP55160 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.77■■□□□ 1.08
NCKAP1LP55160 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
NCKAP1LP55160 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
NCKAP1LP55160 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NCKAP1LP55160 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
NCKAP1LP55160 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
NCKAP1LP55160 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.77■■□□□ 1.08
NCKAP1LP55160 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.77■■□□□ 1.08
NCKAP1LP55160 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.77■■□□□ 1.08
NCKAP1LP55160 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NCKAP1LP55160 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.77■■□□□ 1.08
NCKAP1LP55160 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.77■■□□□ 1.08
NCKAP1LP55160 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NCKAP1LP55160 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NCKAP1LP55160 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NCKAP1LP55160 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
NCKAP1LP55160 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.77■■□□□ 1.08
NCKAP1LP55160 AC073130.3-201ENST00000624389 2278 ntBASIC21.77■■□□□ 1.08
NCKAP1LP55160 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NCKAP1LP55160 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.76■■□□□ 1.07
NCKAP1LP55160 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
NCKAP1LP55160 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NCKAP1LP55160 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
NCKAP1LP55160 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NCKAP1LP55160 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NCKAP1LP55160 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.76■■□□□ 1.07
NCKAP1LP55160 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NCKAP1LP55160 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
NCKAP1LP55160 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NCKAP1LP55160 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
NCKAP1LP55160 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NCKAP1LP55160 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NCKAP1LP55160 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
NCKAP1LP55160 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
NCKAP1LP55160 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.75■■□□□ 1.07
NCKAP1LP55160 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NCKAP1LP55160 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
NCKAP1LP55160 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NCKAP1LP55160 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NCKAP1LP55160 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.75■■□□□ 1.07
NCKAP1LP55160 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NCKAP1LP55160 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.75■■□□□ 1.07
NCKAP1LP55160 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.75■■□□□ 1.07
NCKAP1LP55160 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.75■■□□□ 1.07
NCKAP1LP55160 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.75■■□□□ 1.07
NCKAP1LP55160 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.75■■□□□ 1.07
NCKAP1LP55160 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.75■■□□□ 1.07
NCKAP1LP55160 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.75■■□□□ 1.07
NCKAP1LP55160 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NCKAP1LP55160 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.75■■□□□ 1.07
NCKAP1LP55160 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NCKAP1LP55160 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
NCKAP1LP55160 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.75■■□□□ 1.07
NCKAP1LP55160 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.75■■□□□ 1.07
NCKAP1LP55160 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NCKAP1LP55160 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NCKAP1LP55160 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
NCKAP1LP55160 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NCKAP1LP55160 PKD1P6-201ENST00000343738 4769 ntBASIC21.74■■□□□ 1.07
NCKAP1LP55160 TMEM179-206ENST00000616017 1645 ntBASIC21.74■■□□□ 1.07
NCKAP1LP55160 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.74■■□□□ 1.07
NCKAP1LP55160 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NCKAP1LP55160 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.74■■□□□ 1.07
NCKAP1LP55160 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.74■■□□□ 1.07
NCKAP1LP55160 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.74■■□□□ 1.07
NCKAP1LP55160 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.74■■□□□ 1.07
NCKAP1LP55160 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NCKAP1LP55160 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NCKAP1LP55160 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NCKAP1LP55160 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NCKAP1LP55160 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
NCKAP1LP55160 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.74■■□□□ 1.07
NCKAP1LP55160 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
NCKAP1LP55160 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
NCKAP1LP55160 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NCKAP1LP55160 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.74■■□□□ 1.07
NCKAP1LP55160 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NCKAP1LP55160 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.74■■□□□ 1.07
NCKAP1LP55160 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NCKAP1LP55160 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.74■■□□□ 1.07
NCKAP1LP55160 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NCKAP1LP55160 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.73■■□□□ 1.07
NCKAP1LP55160 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NCKAP1LP55160 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NCKAP1LP55160 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NCKAP1LP55160 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms