Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NR1H2P55055 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
NR1H2P55055 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NR1H2P55055 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
NR1H2P55055 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.75■□□□□ 0.59
NR1H2P55055 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.75■□□□□ 0.59
NR1H2P55055 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NR1H2P55055 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
NR1H2P55055 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.75■□□□□ 0.59
NR1H2P55055 AC080038.1-201ENST00000611274 1154 ntBASIC18.75■□□□□ 0.59
NR1H2P55055 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
NR1H2P55055 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
NR1H2P55055 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NR1H2P55055 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.75■□□□□ 0.59
NR1H2P55055 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NR1H2P55055 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NR1H2P55055 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NR1H2P55055 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NR1H2P55055 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NR1H2P55055 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NR1H2P55055 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NR1H2P55055 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NR1H2P55055 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NR1H2P55055 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NR1H2P55055 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NR1H2P55055 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NR1H2P55055 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NR1H2P55055 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NR1H2P55055 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NR1H2P55055 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NR1H2P55055 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
NR1H2P55055 AL034346.1-201ENST00000568244 1277 ntBASIC18.74■□□□□ 0.59
NR1H2P55055 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NR1H2P55055 BID-214ENST00000617586 542 ntTSL 5 BASIC18.74■□□□□ 0.59
NR1H2P55055 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NR1H2P55055 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NR1H2P55055 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NR1H2P55055 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NR1H2P55055 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
NR1H2P55055 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NR1H2P55055 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NR1H2P55055 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
NR1H2P55055 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NR1H2P55055 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NR1H2P55055 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.73■□□□□ 0.59
NR1H2P55055 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NR1H2P55055 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
NR1H2P55055 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.73■□□□□ 0.59
NR1H2P55055 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.73■□□□□ 0.59
NR1H2P55055 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.73■□□□□ 0.59
NR1H2P55055 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.73■□□□□ 0.59
NR1H2P55055 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NR1H2P55055 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.73■□□□□ 0.59
NR1H2P55055 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NR1H2P55055 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NR1H2P55055 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NR1H2P55055 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.73■□□□□ 0.59
NR1H2P55055 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.73■□□□□ 0.59
NR1H2P55055 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.73■□□□□ 0.59
NR1H2P55055 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.73■□□□□ 0.59
NR1H2P55055 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.73■□□□□ 0.59
NR1H2P55055 KRT18P61-201ENST00000585825 1298 ntBASIC18.73■□□□□ 0.59
NR1H2P55055 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
NR1H2P55055 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.73■□□□□ 0.59
NR1H2P55055 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NR1H2P55055 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NR1H2P55055 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NR1H2P55055 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.73■□□□□ 0.59
NR1H2P55055 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
NR1H2P55055 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.72■□□□□ 0.59
NR1H2P55055 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NR1H2P55055 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NR1H2P55055 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.72■□□□□ 0.59
NR1H2P55055 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
NR1H2P55055 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.72■□□□□ 0.59
NR1H2P55055 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
NR1H2P55055 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NR1H2P55055 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.72■□□□□ 0.59
NR1H2P55055 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NR1H2P55055 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.72■□□□□ 0.59
NR1H2P55055 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.72■□□□□ 0.59
NR1H2P55055 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.72■□□□□ 0.59
NR1H2P55055 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.72■□□□□ 0.59
NR1H2P55055 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.72■□□□□ 0.59
NR1H2P55055 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
NR1H2P55055 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.72■□□□□ 0.59
NR1H2P55055 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NR1H2P55055 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NR1H2P55055 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
NR1H2P55055 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NR1H2P55055 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.72■□□□□ 0.59
NR1H2P55055 AC092720.2-201ENST00000602388 1665 ntBASIC18.72■□□□□ 0.59
NR1H2P55055 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NR1H2P55055 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NR1H2P55055 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NR1H2P55055 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NR1H2P55055 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NR1H2P55055 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NR1H2P55055 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
NR1H2P55055 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms