Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
ATN1P54259 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.93■■□□□ 1.1
ATN1P54259 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.93■■□□□ 1.1
ATN1P54259 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.93■■□□□ 1.1
ATN1P54259 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ATN1P54259 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.93■■□□□ 1.1
ATN1P54259 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.93■■□□□ 1.1
ATN1P54259 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ATN1P54259 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ATN1P54259 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
ATN1P54259 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.93■■□□□ 1.1
ATN1P54259 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.93■■□□□ 1.1
ATN1P54259 AC116562.4-202ENST00000641738 218 ntBASIC21.93■■□□□ 1.1
ATN1P54259 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
ATN1P54259 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
ATN1P54259 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ATN1P54259 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
ATN1P54259 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.92■■□□□ 1.1
ATN1P54259 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.92■■□□□ 1.1
ATN1P54259 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.92■■□□□ 1.1
ATN1P54259 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ATN1P54259 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ATN1P54259 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATN1P54259 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATN1P54259 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATN1P54259 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATN1P54259 FAM207BP-201ENST00000447172 505 ntBASIC21.92■■□□□ 1.1
ATN1P54259 COX11P1-201ENST00000489116 835 ntBASIC21.92■■□□□ 1.1
ATN1P54259 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ATN1P54259 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.92■■□□□ 1.1
ATN1P54259 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ATN1P54259 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.92■■□□□ 1.1
ATN1P54259 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.92■■□□□ 1.1
ATN1P54259 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.92■■□□□ 1.1
ATN1P54259 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATN1P54259 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ATN1P54259 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATN1P54259 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.92■■□□□ 1.1
ATN1P54259 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATN1P54259 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATN1P54259 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.92■■□□□ 1.1
ATN1P54259 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
ATN1P54259 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
ATN1P54259 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.91■■□□□ 1.1
ATN1P54259 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.91■■□□□ 1.1
ATN1P54259 FAM86EP-206ENST00000510506 987 ntBASIC21.91■■□□□ 1.1
ATN1P54259 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.91■■□□□ 1.1
ATN1P54259 AP000692.2-201ENST00000608391 879 ntBASIC21.91■■□□□ 1.1
ATN1P54259 AC130371.2-201ENST00000619443 611 ntBASIC21.91■■□□□ 1.1
ATN1P54259 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.91■■□□□ 1.1
ATN1P54259 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
ATN1P54259 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
ATN1P54259 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.91■■□□□ 1.1
ATN1P54259 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.91■■□□□ 1.1
ATN1P54259 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.91■■□□□ 1.1
ATN1P54259 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATN1P54259 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ATN1P54259 IER3-202ENST00000376377 1350 ntBASIC21.9■■□□□ 1.1
ATN1P54259 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
ATN1P54259 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATN1P54259 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATN1P54259 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
ATN1P54259 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
ATN1P54259 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ATN1P54259 AL450487.1-201ENST00000426799 995 ntBASIC21.9■■□□□ 1.1
ATN1P54259 AC008040.2-201ENST00000461049 708 ntBASIC21.9■■□□□ 1.1
ATN1P54259 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATN1P54259 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.9■■□□□ 1.1
ATN1P54259 AC011298.2-201ENST00000617989 482 ntBASIC21.9■■□□□ 1.1
ATN1P54259 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.9■■□□□ 1.1
ATN1P54259 AC011558.1-201ENST00000623459 338 ntBASIC21.9■■□□□ 1.1
ATN1P54259 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ATN1P54259 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.9■■□□□ 1.1
ATN1P54259 KRT8P17-201ENST00000453110 1448 ntBASIC21.89■■□□□ 1.1
ATN1P54259 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.89■■□□□ 1.1
ATN1P54259 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.89■■□□□ 1.1
ATN1P54259 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.89■■□□□ 1.1
ATN1P54259 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
ATN1P54259 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
ATN1P54259 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ATN1P54259 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ATN1P54259 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ATN1P54259 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.89■■□□□ 1.09
ATN1P54259 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.89■■□□□ 1.09
ATN1P54259 Z99916.3-201ENST00000623422 1080 ntBASIC21.89■■□□□ 1.09
ATN1P54259 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.89■■□□□ 1.09
ATN1P54259 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
ATN1P54259 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
ATN1P54259 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.89■■□□□ 1.09
ATN1P54259 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ATN1P54259 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ATN1P54259 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
ATN1P54259 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.88■■□□□ 1.09
ATN1P54259 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.88■■□□□ 1.09
ATN1P54259 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ATN1P54259 MFAP1P1-201ENST00000442257 1255 ntBASIC21.88■■□□□ 1.09
ATN1P54259 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ATN1P54259 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.88■■□□□ 1.09
ATN1P54259 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.88■■□□□ 1.09
ATN1P54259 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms