Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
ITGA8P53708 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ITGA8P53708 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ITGA8P53708 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.34■□□□□ 0.85
ITGA8P53708 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ITGA8P53708 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ITGA8P53708 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
ITGA8P53708 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.34■□□□□ 0.85
ITGA8P53708 KRT16P6-202ENST00000425692 1426 ntBASIC20.34■□□□□ 0.85
ITGA8P53708 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.34■□□□□ 0.85
ITGA8P53708 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ITGA8P53708 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
ITGA8P53708 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ITGA8P53708 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ITGA8P53708 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ITGA8P53708 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ITGA8P53708 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.33■□□□□ 0.85
ITGA8P53708 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.33■□□□□ 0.85
ITGA8P53708 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ITGA8P53708 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.33■□□□□ 0.85
ITGA8P53708 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ITGA8P53708 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.33■□□□□ 0.85
ITGA8P53708 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
ITGA8P53708 AL031963.3-201ENST00000606441 850 ntBASIC20.33■□□□□ 0.85
ITGA8P53708 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ITGA8P53708 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ITGA8P53708 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.33■□□□□ 0.84
ITGA8P53708 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ITGA8P53708 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
ITGA8P53708 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
ITGA8P53708 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ITGA8P53708 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ITGA8P53708 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
ITGA8P53708 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ITGA8P53708 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.32■□□□□ 0.84
ITGA8P53708 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ITGA8P53708 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.32■□□□□ 0.84
ITGA8P53708 AL032819.2-201ENST00000624543 2162 ntBASIC20.32■□□□□ 0.84
ITGA8P53708 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.32■□□□□ 0.84
ITGA8P53708 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ITGA8P53708 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
ITGA8P53708 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ITGA8P53708 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.32■□□□□ 0.84
ITGA8P53708 AL162412.1-201ENST00000567129 965 ntBASIC20.32■□□□□ 0.84
ITGA8P53708 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
ITGA8P53708 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
ITGA8P53708 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
ITGA8P53708 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
ITGA8P53708 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.32■□□□□ 0.84
ITGA8P53708 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
ITGA8P53708 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.31■□□□□ 0.84
ITGA8P53708 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ITGA8P53708 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
ITGA8P53708 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ITGA8P53708 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ITGA8P53708 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ITGA8P53708 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
ITGA8P53708 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.31■□□□□ 0.84
ITGA8P53708 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.31■□□□□ 0.84
ITGA8P53708 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
ITGA8P53708 MIR5787-201ENST00000611784 55 ntBASIC20.31■□□□□ 0.84
ITGA8P53708 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.31■□□□□ 0.84
ITGA8P53708 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ITGA8P53708 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ITGA8P53708 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ITGA8P53708 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ITGA8P53708 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ITGA8P53708 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.31■□□□□ 0.84
ITGA8P53708 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
ITGA8P53708 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ITGA8P53708 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.31■□□□□ 0.84
ITGA8P53708 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ITGA8P53708 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ITGA8P53708 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ITGA8P53708 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ITGA8P53708 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ITGA8P53708 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ITGA8P53708 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
ITGA8P53708 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ITGA8P53708 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ITGA8P53708 AP001271.2-201ENST00000624018 1556 ntBASIC20.3■□□□□ 0.84
ITGA8P53708 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.3■□□□□ 0.84
ITGA8P53708 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.3■□□□□ 0.84
ITGA8P53708 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ITGA8P53708 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ITGA8P53708 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ITGA8P53708 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.3■□□□□ 0.84
ITGA8P53708 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
ITGA8P53708 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ITGA8P53708 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ITGA8P53708 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ITGA8P53708 AC007322.4-201ENST00000509611 723 ntBASIC20.3■□□□□ 0.84
ITGA8P53708 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ITGA8P53708 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ITGA8P53708 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.3■□□□□ 0.84
ITGA8P53708 MIR6821-201ENST00000617625 74 ntBASIC20.3■□□□□ 0.84
ITGA8P53708 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ITGA8P53708 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ITGA8P53708 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ITGA8P53708 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms