Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.12■□□□□ 0.49
HMGA2P52926 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.12■□□□□ 0.49
HMGA2P52926 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HMGA2P52926 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
HMGA2P52926 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGA2P52926 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HMGA2P52926 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGA2P52926 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGA2P52926 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HMGA2P52926 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HMGA2P52926 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGA2P52926 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.12■□□□□ 0.49
HMGA2P52926 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.12■□□□□ 0.49
HMGA2P52926 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.12■□□□□ 0.49
HMGA2P52926 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGA2P52926 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HMGA2P52926 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGA2P52926 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGA2P52926 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HMGA2P52926 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
HMGA2P52926 AL138781.2-201ENST00000617896 1843 ntBASIC18.12■□□□□ 0.49
HMGA2P52926 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HMGA2P52926 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGA2P52926 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
HMGA2P52926 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
HMGA2P52926 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGA2P52926 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HMGA2P52926 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.11■□□□□ 0.49
HMGA2P52926 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
HMGA2P52926 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.11■□□□□ 0.49
HMGA2P52926 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.11■□□□□ 0.49
HMGA2P52926 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HMGA2P52926 AC013268.1-206ENST00000638368 961 ntBASIC18.11■□□□□ 0.49
HMGA2P52926 AC112229.1-201ENST00000639295 961 ntBASIC18.11■□□□□ 0.49
HMGA2P52926 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.11■□□□□ 0.49
HMGA2P52926 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGA2P52926 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HMGA2P52926 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGA2P52926 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
HMGA2P52926 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGA2P52926 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGA2P52926 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGA2P52926 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
HMGA2P52926 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGA2P52926 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
HMGA2P52926 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGA2P52926 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGA2P52926 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGA2P52926 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGA2P52926 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
HMGA2P52926 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGA2P52926 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.1■□□□□ 0.49
HMGA2P52926 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
HMGA2P52926 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
HMGA2P52926 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGA2P52926 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.1■□□□□ 0.49
HMGA2P52926 PHGDH-210ENST00000641115 1638 ntBASIC18.1■□□□□ 0.49
HMGA2P52926 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.1■□□□□ 0.49
HMGA2P52926 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HMGA2P52926 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.1■□□□□ 0.49
HMGA2P52926 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGA2P52926 HLA-G-202ENST00000376815 851 ntBASIC18.1■□□□□ 0.49
HMGA2P52926 HLA-G-203ENST00000376818 1127 ntBASIC18.1■□□□□ 0.49
HMGA2P52926 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.1■□□□□ 0.49
HMGA2P52926 MIR638-201ENST00000385237 100 ntBASIC18.1■□□□□ 0.49
HMGA2P52926 RARRES2P4-201ENST00000514074 484 ntBASIC18.1■□□□□ 0.49
HMGA2P52926 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.1■□□□□ 0.49
HMGA2P52926 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
HMGA2P52926 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HMGA2P52926 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HMGA2P52926 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGA2P52926 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
HMGA2P52926 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMGA2P52926 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGA2P52926 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGA2P52926 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
HMGA2P52926 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGA2P52926 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.09■□□□□ 0.49
HMGA2P52926 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.09■□□□□ 0.49
HMGA2P52926 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.09■□□□□ 0.49
HMGA2P52926 AC105020.6-201ENST00000621523 1217 ntBASIC18.09■□□□□ 0.49
HMGA2P52926 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
HMGA2P52926 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGA2P52926 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGA2P52926 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
HMGA2P52926 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMGA2P52926 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.09■□□□□ 0.49
HMGA2P52926 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGA2P52926 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGA2P52926 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMGA2P52926 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HMGA2P52926 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.09■□□□□ 0.49
HMGA2P52926 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HMGA2P52926 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HMGA2P52926 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.08■□□□□ 0.49
HMGA2P52926 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HMGA2P52926 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.08■□□□□ 0.49
HMGA2P52926 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.08■□□□□ 0.49
HMGA2P52926 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HMGA2P52926 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms