Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GTF2A1P52655 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GTF2A1P52655 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GTF2A1P52655 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.46■□□□□ 0.71
GTF2A1P52655 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
GTF2A1P52655 AC007225.1-201ENST00000566331 1836 ntBASIC19.46■□□□□ 0.71
GTF2A1P52655 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GTF2A1P52655 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
GTF2A1P52655 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GTF2A1P52655 OR6D1P-202ENST00000641007 5290 ntBASIC19.45■□□□□ 0.7
GTF2A1P52655 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
GTF2A1P52655 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
GTF2A1P52655 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GTF2A1P52655 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GTF2A1P52655 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GTF2A1P52655 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GTF2A1P52655 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
GTF2A1P52655 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
GTF2A1P52655 AL596257.1-201ENST00000641463 2694 ntBASIC19.45■□□□□ 0.7
GTF2A1P52655 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GTF2A1P52655 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GTF2A1P52655 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.45■□□□□ 0.7
GTF2A1P52655 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GTF2A1P52655 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GTF2A1P52655 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.45■□□□□ 0.7
GTF2A1P52655 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
GTF2A1P52655 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GTF2A1P52655 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GTF2A1P52655 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.45■□□□□ 0.7
GTF2A1P52655 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
GTF2A1P52655 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GTF2A1P52655 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GTF2A1P52655 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.44■□□□□ 0.7
GTF2A1P52655 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.44■□□□□ 0.7
GTF2A1P52655 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GTF2A1P52655 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.44■□□□□ 0.7
GTF2A1P52655 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
GTF2A1P52655 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GTF2A1P52655 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
GTF2A1P52655 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.44■□□□□ 0.7
GTF2A1P52655 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
GTF2A1P52655 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GTF2A1P52655 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.44■□□□□ 0.7
GTF2A1P52655 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GTF2A1P52655 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GTF2A1P52655 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
GTF2A1P52655 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GTF2A1P52655 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.44■□□□□ 0.7
GTF2A1P52655 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.44■□□□□ 0.7
GTF2A1P52655 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GTF2A1P52655 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
GTF2A1P52655 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.44■□□□□ 0.7
GTF2A1P52655 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
GTF2A1P52655 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.44■□□□□ 0.7
GTF2A1P52655 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.44■□□□□ 0.7
GTF2A1P52655 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
GTF2A1P52655 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
GTF2A1P52655 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
GTF2A1P52655 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GTF2A1P52655 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
GTF2A1P52655 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GTF2A1P52655 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GTF2A1P52655 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.43■□□□□ 0.7
GTF2A1P52655 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
GTF2A1P52655 CICP6-201ENST00000457191 2729 ntBASIC19.43■□□□□ 0.7
GTF2A1P52655 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GTF2A1P52655 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GTF2A1P52655 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
GTF2A1P52655 HSD17B1P1-201ENST00000590052 955 ntBASIC19.43■□□□□ 0.7
GTF2A1P52655 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
GTF2A1P52655 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
GTF2A1P52655 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
GTF2A1P52655 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GTF2A1P52655 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GTF2A1P52655 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
GTF2A1P52655 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.43■□□□□ 0.7
GTF2A1P52655 AL162727.3-201ENST00000635661 2787 ntBASIC19.43■□□□□ 0.7
GTF2A1P52655 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GTF2A1P52655 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GTF2A1P52655 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
GTF2A1P52655 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.42■□□□□ 0.7
GTF2A1P52655 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GTF2A1P52655 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.42■□□□□ 0.7
GTF2A1P52655 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
GTF2A1P52655 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GTF2A1P52655 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GTF2A1P52655 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GTF2A1P52655 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GTF2A1P52655 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GTF2A1P52655 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GTF2A1P52655 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GTF2A1P52655 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GTF2A1P52655 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.42■□□□□ 0.7
GTF2A1P52655 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.42■□□□□ 0.7
GTF2A1P52655 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.42■□□□□ 0.7
GTF2A1P52655 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GTF2A1P52655 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GTF2A1P52655 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.42■□□□□ 0.7
GTF2A1P52655 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
GTF2A1P52655 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms