Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLK1P49759 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CLK1P49759 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.57■□□□□ 0.56
CLK1P49759 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CLK1P49759 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.57■□□□□ 0.56
CLK1P49759 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.57■□□□□ 0.56
CLK1P49759 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLK1P49759 FAM21FP-204ENST00000608637 956 ntBASIC18.57■□□□□ 0.56
CLK1P49759 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLK1P49759 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
CLK1P49759 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLK1P49759 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLK1P49759 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLK1P49759 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.57■□□□□ 0.56
CLK1P49759 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
CLK1P49759 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLK1P49759 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLK1P49759 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLK1P49759 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.56■□□□□ 0.56
CLK1P49759 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLK1P49759 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CLK1P49759 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLK1P49759 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.56■□□□□ 0.56
CLK1P49759 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.56■□□□□ 0.56
CLK1P49759 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLK1P49759 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLK1P49759 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
CLK1P49759 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLK1P49759 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLK1P49759 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLK1P49759 AC007322.1-201ENST00000426983 750 ntBASIC18.56■□□□□ 0.56
CLK1P49759 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.56■□□□□ 0.56
CLK1P49759 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.56■□□□□ 0.56
CLK1P49759 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.56■□□□□ 0.56
CLK1P49759 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.56■□□□□ 0.56
CLK1P49759 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.56■□□□□ 0.56
CLK1P49759 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.56■□□□□ 0.56
CLK1P49759 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.56■□□□□ 0.56
CLK1P49759 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLK1P49759 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLK1P49759 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLK1P49759 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.56■□□□□ 0.56
CLK1P49759 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLK1P49759 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.56■□□□□ 0.56
CLK1P49759 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLK1P49759 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLK1P49759 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLK1P49759 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLK1P49759 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.55■□□□□ 0.56
CLK1P49759 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLK1P49759 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLK1P49759 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.55■□□□□ 0.56
CLK1P49759 AC004408.2-201ENST00000623613 2777 ntBASIC18.55■□□□□ 0.56
CLK1P49759 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CLK1P49759 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CLK1P49759 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLK1P49759 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CLK1P49759 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLK1P49759 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLK1P49759 CNN2P6-201ENST00000439038 900 ntBASIC18.55■□□□□ 0.56
CLK1P49759 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLK1P49759 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLK1P49759 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLK1P49759 AC080038.1-201ENST00000611274 1154 ntBASIC18.55■□□□□ 0.56
CLK1P49759 IKBKGP1-201ENST00000612193 1073 ntBASIC18.55■□□□□ 0.56
CLK1P49759 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLK1P49759 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLK1P49759 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLK1P49759 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLK1P49759 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.55■□□□□ 0.56
CLK1P49759 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLK1P49759 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLK1P49759 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLK1P49759 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLK1P49759 TNXA-203ENST00000507684 2038 ntBASIC18.54■□□□□ 0.56
CLK1P49759 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CLK1P49759 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.54■□□□□ 0.56
CLK1P49759 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CLK1P49759 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.54■□□□□ 0.56
CLK1P49759 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.54■□□□□ 0.56
CLK1P49759 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.54■□□□□ 0.56
CLK1P49759 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.54■□□□□ 0.56
CLK1P49759 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.54■□□□□ 0.56
CLK1P49759 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.54■□□□□ 0.56
CLK1P49759 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CLK1P49759 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLK1P49759 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLK1P49759 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CLK1P49759 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLK1P49759 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLK1P49759 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLK1P49759 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLK1P49759 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.54■□□□□ 0.56
CLK1P49759 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.54■□□□□ 0.56
CLK1P49759 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLK1P49759 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLK1P49759 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CLK1P49759 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLK1P49759 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.53■□□□□ 0.56
CLK1P49759 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms