Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.86■□□□□ 0.61
GABRA4P48169 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GABRA4P48169 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GABRA4P48169 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.86■□□□□ 0.61
GABRA4P48169 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
GABRA4P48169 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GABRA4P48169 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GABRA4P48169 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GABRA4P48169 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
GABRA4P48169 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GABRA4P48169 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
GABRA4P48169 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GABRA4P48169 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GABRA4P48169 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.86■□□□□ 0.61
GABRA4P48169 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.86■□□□□ 0.61
GABRA4P48169 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.86■□□□□ 0.61
GABRA4P48169 MIR4497-201ENST00000583208 89 ntBASIC18.86■□□□□ 0.61
GABRA4P48169 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
GABRA4P48169 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GABRA4P48169 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.86■□□□□ 0.61
GABRA4P48169 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GABRA4P48169 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GABRA4P48169 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GABRA4P48169 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GABRA4P48169 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GABRA4P48169 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GABRA4P48169 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
GABRA4P48169 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GABRA4P48169 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
GABRA4P48169 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GABRA4P48169 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GABRA4P48169 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.85■□□□□ 0.61
GABRA4P48169 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.85■□□□□ 0.61
GABRA4P48169 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GABRA4P48169 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GABRA4P48169 AL049637.2-201ENST00000641778 930 ntBASIC18.85■□□□□ 0.61
GABRA4P48169 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GABRA4P48169 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.85■□□□□ 0.61
GABRA4P48169 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GABRA4P48169 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GABRA4P48169 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
GABRA4P48169 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GABRA4P48169 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.84■□□□□ 0.61
GABRA4P48169 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
GABRA4P48169 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
GABRA4P48169 AL135905.2-201ENST00000584934 1404 ntBASIC18.84■□□□□ 0.61
GABRA4P48169 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
GABRA4P48169 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GABRA4P48169 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.84■□□□□ 0.61
GABRA4P48169 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GABRA4P48169 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
GABRA4P48169 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.84■□□□□ 0.61
GABRA4P48169 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.84■□□□□ 0.61
GABRA4P48169 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.84■□□□□ 0.61
GABRA4P48169 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GABRA4P48169 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
GABRA4P48169 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.84■□□□□ 0.61
GABRA4P48169 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.84■□□□□ 0.61
GABRA4P48169 AC113410.3-201ENST00000623366 203 ntBASIC18.84■□□□□ 0.61
GABRA4P48169 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.84■□□□□ 0.61
GABRA4P48169 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
GABRA4P48169 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.84■□□□□ 0.61
GABRA4P48169 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GABRA4P48169 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
GABRA4P48169 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GABRA4P48169 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
GABRA4P48169 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.83■□□□□ 0.61
GABRA4P48169 HTR7P1-201ENST00000538670 1336 ntBASIC18.83■□□□□ 0.61
GABRA4P48169 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GABRA4P48169 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
GABRA4P48169 SNORA78-201ENST00000459373 127 ntBASIC18.83■□□□□ 0.6
GABRA4P48169 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.83■□□□□ 0.6
GABRA4P48169 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.83■□□□□ 0.6
GABRA4P48169 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.6
GABRA4P48169 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.83■□□□□ 0.6
GABRA4P48169 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GABRA4P48169 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.83■□□□□ 0.6
GABRA4P48169 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
GABRA4P48169 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GABRA4P48169 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
GABRA4P48169 AC092667.1-201ENST00000434301 2586 ntBASIC18.82■□□□□ 0.6
GABRA4P48169 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GABRA4P48169 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
GABRA4P48169 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.82■□□□□ 0.6
GABRA4P48169 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.82■□□□□ 0.6
GABRA4P48169 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.82■□□□□ 0.6
GABRA4P48169 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.82■□□□□ 0.6
GABRA4P48169 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.82■□□□□ 0.6
GABRA4P48169 AC004264.1-201ENST00000608354 794 ntBASIC18.82■□□□□ 0.6
GABRA4P48169 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.82■□□□□ 0.6
GABRA4P48169 AP006587.1-201ENST00000534129 1502 ntBASIC18.82■□□□□ 0.6
GABRA4P48169 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GABRA4P48169 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GABRA4P48169 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.82■□□□□ 0.6
GABRA4P48169 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.82■□□□□ 0.6
GABRA4P48169 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GABRA4P48169 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.82■□□□□ 0.6
GABRA4P48169 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GABRA4P48169 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
GABRA4P48169 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms