Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC6A9P48067 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC6A9P48067 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC6A9P48067 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC6A9P48067 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.52■□□□□ 0.4
SLC6A9P48067 AC006970.2-201ENST00000450065 779 ntBASIC17.52■□□□□ 0.4
SLC6A9P48067 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC6A9P48067 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC6A9P48067 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.52■□□□□ 0.4
SLC6A9P48067 OR10C1-204ENST00000622521 1039 ntBASIC17.52■□□□□ 0.4
SLC6A9P48067 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SLC6A9P48067 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.52■□□□□ 0.4
SLC6A9P48067 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.52■□□□□ 0.39
SLC6A9P48067 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.52■□□□□ 0.39
SLC6A9P48067 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SLC6A9P48067 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.52■□□□□ 0.39
SLC6A9P48067 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC6A9P48067 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC6A9P48067 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
SLC6A9P48067 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC6A9P48067 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
SLC6A9P48067 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.52■□□□□ 0.39
SLC6A9P48067 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A9P48067 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SLC6A9P48067 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SLC6A9P48067 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.51■□□□□ 0.39
SLC6A9P48067 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A9P48067 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A9P48067 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A9P48067 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A9P48067 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.51■□□□□ 0.39
SLC6A9P48067 AL355472.2-201ENST00000422958 438 ntBASIC17.51■□□□□ 0.39
SLC6A9P48067 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
SLC6A9P48067 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A9P48067 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
SLC6A9P48067 CYP2T3P-201ENST00000601990 817 ntBASIC17.51■□□□□ 0.39
SLC6A9P48067 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SLC6A9P48067 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SLC6A9P48067 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
SLC6A9P48067 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A9P48067 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.51■□□□□ 0.39
SLC6A9P48067 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A9P48067 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A9P48067 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
SLC6A9P48067 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A9P48067 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.5■□□□□ 0.39
SLC6A9P48067 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC6A9P48067 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A9P48067 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A9P48067 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A9P48067 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SLC6A9P48067 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A9P48067 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A9P48067 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A9P48067 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A9P48067 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A9P48067 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.5■□□□□ 0.39
SLC6A9P48067 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC6A9P48067 AL589743.5-201ENST00000616611 1050 ntBASIC17.5■□□□□ 0.39
SLC6A9P48067 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.5■□□□□ 0.39
SLC6A9P48067 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC6A9P48067 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A9P48067 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A9P48067 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A9P48067 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A9P48067 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A9P48067 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A9P48067 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A9P48067 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.5■□□□□ 0.39
SLC6A9P48067 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC6A9P48067 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC6A9P48067 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC6A9P48067 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SLC6A9P48067 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.49■□□□□ 0.39
SLC6A9P48067 AC010980.2-201ENST00000587099 1412 ntBASIC17.49■□□□□ 0.39
SLC6A9P48067 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.49■□□□□ 0.39
SLC6A9P48067 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC6A9P48067 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC6A9P48067 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.49■□□□□ 0.39
SLC6A9P48067 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
SLC6A9P48067 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC6A9P48067 HLA-L-209ENST00000420110 1011 ntBASIC17.49■□□□□ 0.39
SLC6A9P48067 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC6A9P48067 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.49■□□□□ 0.39
SLC6A9P48067 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.49■□□□□ 0.39
SLC6A9P48067 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SLC6A9P48067 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SLC6A9P48067 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC6A9P48067 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC6A9P48067 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.49■□□□□ 0.39
SLC6A9P48067 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC6A9P48067 BX119927.1-201ENST00000636596 1552 ntBASIC17.49■□□□□ 0.39
SLC6A9P48067 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A9P48067 AC120498.9-201ENST00000339021 3867 ntBASIC17.48■□□□□ 0.39
SLC6A9P48067 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.48■□□□□ 0.39
SLC6A9P48067 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A9P48067 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.48■□□□□ 0.39
SLC6A9P48067 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A9P48067 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A9P48067 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms