Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CXCL5P42830 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CXCL5P42830 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC13.36□□□□□ -0.27
CXCL5P42830 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CXCL5P42830 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CXCL5P42830 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CXCL5P42830 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CXCL5P42830 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC13.36□□□□□ -0.27
CXCL5P42830 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CXCL5P42830 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC13.36□□□□□ -0.27
CXCL5P42830 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CXCL5P42830 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CXCL5P42830 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CXCL5P42830 TNXA-203ENST00000507684 2038 ntBASIC13.35□□□□□ -0.27
CXCL5P42830 OR6D1P-202ENST00000641007 5290 ntBASIC13.35□□□□□ -0.27
CXCL5P42830 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CXCL5P42830 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CXCL5P42830 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CXCL5P42830 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CXCL5P42830 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CXCL5P42830 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CXCL5P42830 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CXCL5P42830 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CXCL5P42830 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC13.35□□□□□ -0.27
CXCL5P42830 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CXCL5P42830 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CXCL5P42830 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CXCL5P42830 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC13.35□□□□□ -0.27
CXCL5P42830 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CXCL5P42830 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CXCL5P42830 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CXCL5P42830 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC13.35□□□□□ -0.27
CXCL5P42830 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC13.35□□□□□ -0.27
CXCL5P42830 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CXCL5P42830 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CXCL5P42830 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CXCL5P42830 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC13.35□□□□□ -0.27
CXCL5P42830 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CXCL5P42830 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
CXCL5P42830 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC13.35□□□□□ -0.27
CXCL5P42830 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CXCL5P42830 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC13.35□□□□□ -0.27
CXCL5P42830 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CXCL5P42830 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CXCL5P42830 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC13.35□□□□□ -0.27
CXCL5P42830 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
CXCL5P42830 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
CXCL5P42830 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CXCL5P42830 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CXCL5P42830 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CXCL5P42830 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CXCL5P42830 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CXCL5P42830 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC13.34□□□□□ -0.27
CXCL5P42830 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CXCL5P42830 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC13.34□□□□□ -0.27
CXCL5P42830 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CXCL5P42830 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CXCL5P42830 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
CXCL5P42830 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC13.34□□□□□ -0.27
CXCL5P42830 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CXCL5P42830 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CXCL5P42830 IRS3P-201ENST00000223076 1006 ntBASIC13.34□□□□□ -0.27
CXCL5P42830 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC13.34□□□□□ -0.27
CXCL5P42830 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CXCL5P42830 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC13.34□□□□□ -0.27
CXCL5P42830 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC13.34□□□□□ -0.27
CXCL5P42830 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC13.34□□□□□ -0.27
CXCL5P42830 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CXCL5P42830 CD44-222ENST00000526025 1052 ntTSL 2 BASIC13.34□□□□□ -0.27
CXCL5P42830 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC13.34□□□□□ -0.27
CXCL5P42830 AC131212.1-201ENST00000613771 668 ntBASIC13.34□□□□□ -0.27
CXCL5P42830 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC13.34□□□□□ -0.27
CXCL5P42830 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CXCL5P42830 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CXCL5P42830 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CXCL5P42830 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC13.34□□□□□ -0.27
CXCL5P42830 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC13.34□□□□□ -0.27
CXCL5P42830 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CXCL5P42830 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CXCL5P42830 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CXCL5P42830 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CXCL5P42830 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC13.34□□□□□ -0.27
CXCL5P42830 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CXCL5P42830 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CXCL5P42830 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CXCL5P42830 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CXCL5P42830 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC13.33□□□□□ -0.27
CXCL5P42830 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CXCL5P42830 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC13.33□□□□□ -0.27
CXCL5P42830 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CXCL5P42830 AC120498.9-201ENST00000339021 3867 ntBASIC13.33□□□□□ -0.28
CXCL5P42830 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CXCL5P42830 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CXCL5P42830 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CXCL5P42830 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC13.33□□□□□ -0.28
CXCL5P42830 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CXCL5P42830 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CXCL5P42830 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC13.33□□□□□ -0.28
CXCL5P42830 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CXCL5P42830 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms