Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCLP35914 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCLP35914 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.8■□□□□ 0.76
HMGCLP35914 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.8■□□□□ 0.76
HMGCLP35914 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.8■□□□□ 0.76
HMGCLP35914 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HMGCLP35914 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.8■□□□□ 0.76
HMGCLP35914 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCLP35914 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCLP35914 AC018553.1-201ENST00000616682 1458 ntBASIC19.79■□□□□ 0.76
HMGCLP35914 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCLP35914 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
HMGCLP35914 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCLP35914 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCLP35914 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCLP35914 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCLP35914 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
HMGCLP35914 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCLP35914 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.79■□□□□ 0.76
HMGCLP35914 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.79■□□□□ 0.76
HMGCLP35914 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.79■□□□□ 0.76
HMGCLP35914 MIR4651-201ENST00000582622 73 ntBASIC19.79■□□□□ 0.76
HMGCLP35914 AL121829.2-201ENST00000620908 328 ntBASIC19.79■□□□□ 0.76
HMGCLP35914 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCLP35914 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCLP35914 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.79■□□□□ 0.76
HMGCLP35914 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.79■□□□□ 0.76
HMGCLP35914 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCLP35914 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCLP35914 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCLP35914 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.79■□□□□ 0.76
HMGCLP35914 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.79■□□□□ 0.76
HMGCLP35914 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.79■□□□□ 0.76
HMGCLP35914 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.78■□□□□ 0.76
HMGCLP35914 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCLP35914 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCLP35914 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.78■□□□□ 0.76
HMGCLP35914 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCLP35914 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HMGCLP35914 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCLP35914 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.78■□□□□ 0.76
HMGCLP35914 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCLP35914 KRT17P3-201ENST00000420566 1262 ntBASIC19.78■□□□□ 0.76
HMGCLP35914 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.78■□□□□ 0.76
HMGCLP35914 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCLP35914 AL121906.2-201ENST00000621597 723 ntBASIC19.78■□□□□ 0.76
HMGCLP35914 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCLP35914 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCLP35914 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCLP35914 TFP1-202ENST00000475455 1573 ntBASIC19.78■□□□□ 0.76
HMGCLP35914 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCLP35914 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCLP35914 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.78■□□□□ 0.76
HMGCLP35914 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.77■□□□□ 0.76
HMGCLP35914 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.77■□□□□ 0.76
HMGCLP35914 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
HMGCLP35914 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.77■□□□□ 0.76
HMGCLP35914 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGCLP35914 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.77■□□□□ 0.76
HMGCLP35914 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.77■□□□□ 0.76
HMGCLP35914 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.77■□□□□ 0.76
HMGCLP35914 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HMGCLP35914 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.77■□□□□ 0.76
HMGCLP35914 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.77■□□□□ 0.76
HMGCLP35914 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
HMGCLP35914 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGCLP35914 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HMGCLP35914 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
HMGCLP35914 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.76■□□□□ 0.75
HMGCLP35914 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.76■□□□□ 0.75
HMGCLP35914 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HMGCLP35914 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
HMGCLP35914 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGCLP35914 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.76■□□□□ 0.75
HMGCLP35914 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGCLP35914 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGCLP35914 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
HMGCLP35914 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGCLP35914 POU5F1P3-201ENST00000428824 1078 ntBASIC19.76■□□□□ 0.75
HMGCLP35914 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.76■□□□□ 0.75
HMGCLP35914 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGCLP35914 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.76■□□□□ 0.75
HMGCLP35914 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGCLP35914 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGCLP35914 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.75■□□□□ 0.75
HMGCLP35914 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGCLP35914 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HMGCLP35914 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
HMGCLP35914 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGCLP35914 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGCLP35914 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGCLP35914 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.75■□□□□ 0.75
HMGCLP35914 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGCLP35914 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGCLP35914 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
HMGCLP35914 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGCLP35914 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGCLP35914 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.75■□□□□ 0.75
HMGCLP35914 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HMGCLP35914 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms