Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KRT20P35900 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT20P35900 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT20P35900 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT20P35900 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
KRT20P35900 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.82■□□□□ 0.6
KRT20P35900 AC018445.3-201ENST00000624177 1945 ntBASIC18.82■□□□□ 0.6
KRT20P35900 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
KRT20P35900 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT20P35900 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT20P35900 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT20P35900 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
KRT20P35900 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
KRT20P35900 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT20P35900 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT20P35900 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.81■□□□□ 0.6
KRT20P35900 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
KRT20P35900 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT20P35900 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT20P35900 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT20P35900 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
KRT20P35900 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT20P35900 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT20P35900 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.81■□□□□ 0.6
KRT20P35900 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT20P35900 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.81■□□□□ 0.6
KRT20P35900 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KRT20P35900 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT20P35900 KRT18P68-201ENST00000392293 1000 ntBASIC18.81■□□□□ 0.6
KRT20P35900 LSM12P1-201ENST00000411836 588 ntBASIC18.81■□□□□ 0.6
KRT20P35900 NCF1B-203ENST00000435988 1254 ntBASIC18.81■□□□□ 0.6
KRT20P35900 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.81■□□□□ 0.6
KRT20P35900 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.81■□□□□ 0.6
KRT20P35900 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.81■□□□□ 0.6
KRT20P35900 CYP2T3P-201ENST00000601990 817 ntBASIC18.81■□□□□ 0.6
KRT20P35900 AL589743.5-201ENST00000616611 1050 ntBASIC18.81■□□□□ 0.6
KRT20P35900 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
KRT20P35900 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KRT20P35900 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KRT20P35900 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.81■□□□□ 0.6
KRT20P35900 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT20P35900 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT20P35900 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.81■□□□□ 0.6
KRT20P35900 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT20P35900 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT20P35900 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT20P35900 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
KRT20P35900 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.8■□□□□ 0.6
KRT20P35900 AC116562.4-201ENST00000641316 2276 ntBASIC18.8■□□□□ 0.6
KRT20P35900 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KRT20P35900 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KRT20P35900 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KRT20P35900 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.8■□□□□ 0.6
KRT20P35900 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.8■□□□□ 0.6
KRT20P35900 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.8■□□□□ 0.6
KRT20P35900 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.8■□□□□ 0.6
KRT20P35900 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
KRT20P35900 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.8■□□□□ 0.6
KRT20P35900 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KRT20P35900 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT20P35900 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT20P35900 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT20P35900 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT20P35900 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
KRT20P35900 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT20P35900 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT20P35900 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT20P35900 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.79■□□□□ 0.6
KRT20P35900 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT20P35900 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.79■□□□□ 0.6
KRT20P35900 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
KRT20P35900 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
KRT20P35900 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
KRT20P35900 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT20P35900 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
KRT20P35900 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT20P35900 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT20P35900 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT20P35900 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT20P35900 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
KRT20P35900 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
KRT20P35900 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT20P35900 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.79■□□□□ 0.6
KRT20P35900 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.79■□□□□ 0.6
KRT20P35900 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT20P35900 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.79■□□□□ 0.6
KRT20P35900 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT20P35900 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT20P35900 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.79■□□□□ 0.6
KRT20P35900 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.79■□□□□ 0.6
KRT20P35900 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT20P35900 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.79■□□□□ 0.6
KRT20P35900 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT20P35900 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.78■□□□□ 0.6
KRT20P35900 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KRT20P35900 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
KRT20P35900 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.78■□□□□ 0.6
KRT20P35900 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT20P35900 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT20P35900 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms