Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.04■□□□□ 0.8
RPA3P35244 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPA3P35244 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RPA3P35244 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
RPA3P35244 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RPA3P35244 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPA3P35244 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
RPA3P35244 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.04■□□□□ 0.8
RPA3P35244 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPA3P35244 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPA3P35244 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPA3P35244 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.03■□□□□ 0.8
RPA3P35244 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RPA3P35244 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPA3P35244 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
RPA3P35244 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RPA3P35244 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.03■□□□□ 0.8
RPA3P35244 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPA3P35244 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPA3P35244 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.03■□□□□ 0.8
RPA3P35244 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RPA3P35244 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.03■□□□□ 0.8
RPA3P35244 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RPA3P35244 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.03■□□□□ 0.8
RPA3P35244 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RPA3P35244 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
RPA3P35244 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPA3P35244 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPA3P35244 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RPA3P35244 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RPA3P35244 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RPA3P35244 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPA3P35244 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
RPA3P35244 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RPA3P35244 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RPA3P35244 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.03■□□□□ 0.8
RPA3P35244 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.03■□□□□ 0.8
RPA3P35244 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.03■□□□□ 0.8
RPA3P35244 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
RPA3P35244 Z82202.1-201ENST00000623446 1880 ntBASIC20.03■□□□□ 0.8
RPA3P35244 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPA3P35244 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPA3P35244 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.02■□□□□ 0.8
RPA3P35244 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.02■□□□□ 0.8
RPA3P35244 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RPA3P35244 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
RPA3P35244 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPA3P35244 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.02■□□□□ 0.8
RPA3P35244 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
RPA3P35244 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.02■□□□□ 0.8
RPA3P35244 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
RPA3P35244 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
RPA3P35244 AC231657.2-201ENST00000624556 255 ntBASIC20.02■□□□□ 0.8
RPA3P35244 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RPA3P35244 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RPA3P35244 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPA3P35244 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RPA3P35244 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RPA3P35244 AC093503.3-201ENST00000624917 2352 ntBASIC20.01■□□□□ 0.79
RPA3P35244 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPA3P35244 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RPA3P35244 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RPA3P35244 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.01■□□□□ 0.79
RPA3P35244 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPA3P35244 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPA3P35244 AC091799.1-201ENST00000422823 811 ntBASIC20.01■□□□□ 0.79
RPA3P35244 AC007322.1-201ENST00000426983 750 ntBASIC20.01■□□□□ 0.79
RPA3P35244 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.01■□□□□ 0.79
RPA3P35244 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.01■□□□□ 0.79
RPA3P35244 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.01■□□□□ 0.79
RPA3P35244 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.01■□□□□ 0.79
RPA3P35244 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RPA3P35244 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPA3P35244 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPA3P35244 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
RPA3P35244 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.01■□□□□ 0.79
RPA3P35244 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20■□□□□ 0.79
RPA3P35244 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
RPA3P35244 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20■□□□□ 0.79
RPA3P35244 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20■□□□□ 0.79
RPA3P35244 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20■□□□□ 0.79
RPA3P35244 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20■□□□□ 0.79
RPA3P35244 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPA3P35244 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
RPA3P35244 AC073111.5-205ENST00000641717 521 ntBASIC20■□□□□ 0.79
RPA3P35244 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPA3P35244 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20■□□□□ 0.79
RPA3P35244 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RPA3P35244 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RPA3P35244 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPA3P35244 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
RPA3P35244 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RPA3P35244 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.99■□□□□ 0.79
RPA3P35244 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPA3P35244 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.99■□□□□ 0.79
RPA3P35244 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPA3P35244 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.99■□□□□ 0.79
RPA3P35244 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.99■□□□□ 0.79
RPA3P35244 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RPA3P35244 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms