Protein–RNA interactions for Protein: P25440

BRD2, Bromodomain-containing protein 2, humanhuman

Known RBP Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2P25440 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.28■■□□□ 1
BRD2P25440 AC023632.3-201ENST00000521633 145 ntBASIC21.28■■□□□ 1
BRD2P25440 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.28■■□□□ 1
BRD2P25440 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.28■■□□□ 1
BRD2P25440 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BRD2P25440 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
BRD2P25440 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BRD2P25440 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BRD2P25440 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
BRD2P25440 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.28■■□□□ 1
BRD2P25440 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.28■■□□□ 1
BRD2P25440 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
BRD2P25440 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.27■■□□□ 1
BRD2P25440 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BRD2P25440 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.27■■□□□ 1
BRD2P25440 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BRD2P25440 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BRD2P25440 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.27■■□□□ 1
BRD2P25440 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.27■■□□□ 1
BRD2P25440 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.27■■□□□ 1
BRD2P25440 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.27■■□□□ 1
BRD2P25440 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.27■■□□□ 1
BRD2P25440 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.27■■□□□ 1
BRD2P25440 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.27■■□□□ 1
BRD2P25440 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
BRD2P25440 AL691432.2-201ENST00000607222 2038 ntBASIC21.27■■□□□ 1
BRD2P25440 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
BRD2P25440 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
BRD2P25440 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
BRD2P25440 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
BRD2P25440 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
BRD2P25440 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.26■□□□□ 0.99
BRD2P25440 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BRD2P25440 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.26■□□□□ 0.99
BRD2P25440 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BRD2P25440 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
BRD2P25440 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BRD2P25440 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BRD2P25440 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BRD2P25440 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BRD2P25440 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BRD2P25440 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.26■□□□□ 0.99
BRD2P25440 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.26■□□□□ 0.99
BRD2P25440 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.26■□□□□ 0.99
BRD2P25440 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.26■□□□□ 0.99
BRD2P25440 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.26■□□□□ 0.99
BRD2P25440 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
BRD2P25440 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BRD2P25440 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BRD2P25440 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BRD2P25440 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.26■□□□□ 0.99
BRD2P25440 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
BRD2P25440 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BRD2P25440 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
BRD2P25440 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.25■□□□□ 0.99
BRD2P25440 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
BRD2P25440 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BRD2P25440 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
BRD2P25440 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BRD2P25440 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
BRD2P25440 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.25■□□□□ 0.99
BRD2P25440 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.25■□□□□ 0.99
BRD2P25440 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
BRD2P25440 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
BRD2P25440 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BRD2P25440 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
BRD2P25440 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.25■□□□□ 0.99
BRD2P25440 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC21.25■□□□□ 0.99
BRD2P25440 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
BRD2P25440 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
BRD2P25440 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
BRD2P25440 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.24■□□□□ 0.99
BRD2P25440 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
BRD2P25440 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BRD2P25440 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
BRD2P25440 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
BRD2P25440 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BRD2P25440 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BRD2P25440 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BRD2P25440 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BRD2P25440 HLA-G-202ENST00000376815 851 ntBASIC21.24■□□□□ 0.99
BRD2P25440 HLA-G-203ENST00000376818 1127 ntBASIC21.24■□□□□ 0.99
BRD2P25440 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.24■□□□□ 0.99
BRD2P25440 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
BRD2P25440 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.24■□□□□ 0.99
BRD2P25440 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.24■□□□□ 0.99
BRD2P25440 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
BRD2P25440 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC21.24■□□□□ 0.99
BRD2P25440 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BRD2P25440 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
BRD2P25440 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
BRD2P25440 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
BRD2P25440 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
BRD2P25440 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.23■□□□□ 0.99
BRD2P25440 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
BRD2P25440 AC092368.3-202ENST00000574180 1591 ntBASIC21.23■□□□□ 0.99
BRD2P25440 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
BRD2P25440 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
BRD2P25440 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
BRD2P25440 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms