Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PEPDP12955 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PEPDP12955 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PEPDP12955 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.34■□□□□ 0.53
PEPDP12955 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.34■□□□□ 0.53
PEPDP12955 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.34■□□□□ 0.53
PEPDP12955 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.34■□□□□ 0.53
PEPDP12955 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.34■□□□□ 0.53
PEPDP12955 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PEPDP12955 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PEPDP12955 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.34■□□□□ 0.53
PEPDP12955 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PEPDP12955 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.34■□□□□ 0.53
PEPDP12955 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PEPDP12955 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PEPDP12955 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.34■□□□□ 0.53
PEPDP12955 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PEPDP12955 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PEPDP12955 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PEPDP12955 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PEPDP12955 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
PEPDP12955 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PEPDP12955 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PEPDP12955 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
PEPDP12955 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PEPDP12955 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
PEPDP12955 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
PEPDP12955 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
PEPDP12955 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PEPDP12955 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PEPDP12955 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.33■□□□□ 0.52
PEPDP12955 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.33■□□□□ 0.52
PEPDP12955 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.33■□□□□ 0.52
PEPDP12955 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.33■□□□□ 0.52
PEPDP12955 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.33■□□□□ 0.52
PEPDP12955 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
PEPDP12955 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PEPDP12955 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PEPDP12955 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PEPDP12955 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
PEPDP12955 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.33■□□□□ 0.52
PEPDP12955 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PEPDP12955 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
PEPDP12955 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PEPDP12955 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PEPDP12955 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PEPDP12955 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PEPDP12955 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PEPDP12955 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.32■□□□□ 0.52
PEPDP12955 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PEPDP12955 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PEPDP12955 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PEPDP12955 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.32■□□□□ 0.52
PEPDP12955 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.32■□□□□ 0.52
PEPDP12955 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
PEPDP12955 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PEPDP12955 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PEPDP12955 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PEPDP12955 RNA5SP413-201ENST00000516373 109 ntBASIC18.32■□□□□ 0.52
PEPDP12955 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.32■□□□□ 0.52
PEPDP12955 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.32■□□□□ 0.52
PEPDP12955 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.32■□□□□ 0.52
PEPDP12955 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.32■□□□□ 0.52
PEPDP12955 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PEPDP12955 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PEPDP12955 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PEPDP12955 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PEPDP12955 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.32■□□□□ 0.52
PEPDP12955 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PEPDP12955 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.31■□□□□ 0.52
PEPDP12955 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.31■□□□□ 0.52
PEPDP12955 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PEPDP12955 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PEPDP12955 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.31■□□□□ 0.52
PEPDP12955 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.31■□□□□ 0.52
PEPDP12955 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PEPDP12955 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PEPDP12955 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.31■□□□□ 0.52
PEPDP12955 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.31■□□□□ 0.52
PEPDP12955 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.31■□□□□ 0.52
PEPDP12955 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.31■□□□□ 0.52
PEPDP12955 C2orf69P4-201ENST00000565394 541 ntBASIC18.31■□□□□ 0.52
PEPDP12955 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.31■□□□□ 0.52
PEPDP12955 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PEPDP12955 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PEPDP12955 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.31■□□□□ 0.52
PEPDP12955 TCF3P1-201ENST00000423021 1937 ntBASIC18.31■□□□□ 0.52
PEPDP12955 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PEPDP12955 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PEPDP12955 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PEPDP12955 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.3■□□□□ 0.52
PEPDP12955 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PEPDP12955 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PEPDP12955 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PEPDP12955 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PEPDP12955 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.3■□□□□ 0.52
PEPDP12955 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PEPDP12955 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.3■□□□□ 0.52
PEPDP12955 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PEPDP12955 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms