Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM17P0DL12 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM17P0DL12 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SMIM17P0DL12 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC14.76□□□□□ -0.05
SMIM17P0DL12 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SMIM17P0DL12 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM17P0DL12 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM17P0DL12 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC14.75□□□□□ -0.05
SMIM17P0DL12 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SMIM17P0DL12 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC14.75□□□□□ -0.05
SMIM17P0DL12 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM17P0DL12 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM17P0DL12 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM17P0DL12 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC14.75□□□□□ -0.05
SMIM17P0DL12 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM17P0DL12 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM17P0DL12 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM17P0DL12 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM17P0DL12 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC14.75□□□□□ -0.05
SMIM17P0DL12 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC14.75□□□□□ -0.05
SMIM17P0DL12 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC14.75□□□□□ -0.05
SMIM17P0DL12 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC14.75□□□□□ -0.05
SMIM17P0DL12 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SMIM17P0DL12 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM17P0DL12 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM17P0DL12 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM17P0DL12 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC14.75□□□□□ -0.05
SMIM17P0DL12 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM17P0DL12 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SMIM17P0DL12 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM17P0DL12 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM17P0DL12 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM17P0DL12 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SMIM17P0DL12 FER1L4-210ENST00000615531 5998 ntBASIC14.75□□□□□ -0.05
SMIM17P0DL12 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM17P0DL12 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM17P0DL12 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM17P0DL12 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC14.74□□□□□ -0.05
SMIM17P0DL12 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM17P0DL12 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM17P0DL12 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM17P0DL12 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM17P0DL12 MPST-204ENST00000404393 1329 ntTSL 5 BASIC14.74□□□□□ -0.05
SMIM17P0DL12 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
SMIM17P0DL12 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM17P0DL12 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SMIM17P0DL12 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM17P0DL12 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM17P0DL12 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC14.74□□□□□ -0.05
SMIM17P0DL12 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM17P0DL12 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC14.74□□□□□ -0.05
SMIM17P0DL12 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC14.74□□□□□ -0.05
SMIM17P0DL12 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM17P0DL12 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SMIM17P0DL12 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM17P0DL12 NOC2LP1-202ENST00000452600 2235 ntBASIC14.74□□□□□ -0.05
SMIM17P0DL12 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM17P0DL12 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM17P0DL12 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM17P0DL12 AP000974.1-201ENST00000623909 2387 ntBASIC14.74□□□□□ -0.05
SMIM17P0DL12 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM17P0DL12 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC14.73□□□□□ -0.05
SMIM17P0DL12 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
SMIM17P0DL12 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
SMIM17P0DL12 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM17P0DL12 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.73□□□□□ -0.05
SMIM17P0DL12 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC14.73□□□□□ -0.05
SMIM17P0DL12 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM17P0DL12 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM17P0DL12 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM17P0DL12 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM17P0DL12 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC14.73□□□□□ -0.05
SMIM17P0DL12 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC14.73□□□□□ -0.05
SMIM17P0DL12 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC14.73□□□□□ -0.05
SMIM17P0DL12 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC14.73□□□□□ -0.05
SMIM17P0DL12 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM17P0DL12 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC14.73□□□□□ -0.05
SMIM17P0DL12 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SMIM17P0DL12 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC14.73□□□□□ -0.05
SMIM17P0DL12 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM17P0DL12 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC14.73□□□□□ -0.05
SMIM17P0DL12 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM17P0DL12 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SMIM17P0DL12 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM17P0DL12 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM17P0DL12 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM17P0DL12 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM17P0DL12 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
SMIM17P0DL12 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SMIM17P0DL12 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
SMIM17P0DL12 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM17P0DL12 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC14.73□□□□□ -0.05
SMIM17P0DL12 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.73□□□□□ -0.05
SMIM17P0DL12 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC14.72□□□□□ -0.05
SMIM17P0DL12 TCF3P1-201ENST00000423021 1937 ntBASIC14.72□□□□□ -0.05
SMIM17P0DL12 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMIM17P0DL12 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC14.72□□□□□ -0.05
SMIM17P0DL12 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMIM17P0DL12 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMIM17P0DL12 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms