Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLTAP09496 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.69■■□□□ 1.06
CLTAP09496 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLTAP09496 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.69■■□□□ 1.06
CLTAP09496 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.69■■□□□ 1.06
CLTAP09496 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLTAP09496 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CLTAP09496 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLTAP09496 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
CLTAP09496 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.68■■□□□ 1.06
CLTAP09496 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.68■■□□□ 1.06
CLTAP09496 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLTAP09496 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
CLTAP09496 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLTAP09496 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.68■■□□□ 1.06
CLTAP09496 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CLTAP09496 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CLTAP09496 MTDHP1-201ENST00000605323 784 ntBASIC21.68■■□□□ 1.06
CLTAP09496 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
CLTAP09496 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.68■■□□□ 1.06
CLTAP09496 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLTAP09496 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLTAP09496 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.68■■□□□ 1.06
CLTAP09496 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLTAP09496 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
CLTAP09496 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CLTAP09496 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.67■■□□□ 1.06
CLTAP09496 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLTAP09496 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.67■■□□□ 1.06
CLTAP09496 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLTAP09496 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLTAP09496 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLTAP09496 KRT16P6-202ENST00000425692 1426 ntBASIC21.67■■□□□ 1.06
CLTAP09496 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLTAP09496 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CLTAP09496 GCSHP5-201ENST00000443090 522 ntBASIC21.67■■□□□ 1.06
CLTAP09496 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
CLTAP09496 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.67■■□□□ 1.06
CLTAP09496 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.67■■□□□ 1.06
CLTAP09496 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CLTAP09496 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.67■■□□□ 1.06
CLTAP09496 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLTAP09496 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.67■■□□□ 1.06
CLTAP09496 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLTAP09496 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLTAP09496 AC124283.5-201ENST00000624661 1809 ntBASIC21.66■■□□□ 1.06
CLTAP09496 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLTAP09496 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLTAP09496 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.66■■□□□ 1.06
CLTAP09496 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLTAP09496 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLTAP09496 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLTAP09496 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLTAP09496 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLTAP09496 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLTAP09496 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.66■■□□□ 1.06
CLTAP09496 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.66■■□□□ 1.06
CLTAP09496 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLTAP09496 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
CLTAP09496 AC142381.4-202ENST00000563973 229 ntBASIC21.66■■□□□ 1.06
CLTAP09496 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.66■■□□□ 1.06
CLTAP09496 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.66■■□□□ 1.06
CLTAP09496 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.66■■□□□ 1.06
CLTAP09496 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLTAP09496 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.66■■□□□ 1.06
CLTAP09496 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLTAP09496 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLTAP09496 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLTAP09496 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CLTAP09496 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLTAP09496 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLTAP09496 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLTAP09496 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.65■■□□□ 1.06
CLTAP09496 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLTAP09496 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLTAP09496 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.65■■□□□ 1.06
CLTAP09496 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.65■■□□□ 1.06
CLTAP09496 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLTAP09496 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CLTAP09496 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLTAP09496 AL121829.2-201ENST00000620908 328 ntBASIC21.65■■□□□ 1.06
CLTAP09496 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLTAP09496 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLTAP09496 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLTAP09496 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CLTAP09496 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CLTAP09496 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CLTAP09496 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.64■■□□□ 1.06
CLTAP09496 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CLTAP09496 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
CLTAP09496 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CLTAP09496 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CLTAP09496 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.64■■□□□ 1.05
CLTAP09496 C1QBPP2-201ENST00000528754 825 ntBASIC21.64■■□□□ 1.05
CLTAP09496 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CLTAP09496 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CLTAP09496 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.64■■□□□ 1.05
CLTAP09496 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLTAP09496 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.63■■□□□ 1.05
CLTAP09496 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms