Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CTSDP07339 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTSDP07339 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTSDP07339 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTSDP07339 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTSDP07339 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.46■□□□□ 0.23
CTSDP07339 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTSDP07339 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTSDP07339 AC097381.1-201ENST00000429019 1296 ntBASIC16.46■□□□□ 0.23
CTSDP07339 CDV3P1-201ENST00000471403 739 ntBASIC16.46■□□□□ 0.23
CTSDP07339 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.46■□□□□ 0.23
CTSDP07339 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.46■□□□□ 0.23
CTSDP07339 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.46■□□□□ 0.23
CTSDP07339 AP001160.3-201ENST00000601484 763 ntBASIC16.46■□□□□ 0.23
CTSDP07339 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTSDP07339 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CTSDP07339 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTSDP07339 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CTSDP07339 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTSDP07339 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTSDP07339 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.46■□□□□ 0.22
CTSDP07339 NEFHP1-201ENST00000412845 2629 ntBASIC16.46■□□□□ 0.22
CTSDP07339 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
CTSDP07339 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSDP07339 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSDP07339 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSDP07339 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.45■□□□□ 0.22
CTSDP07339 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSDP07339 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.45■□□□□ 0.22
CTSDP07339 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTSDP07339 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSDP07339 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSDP07339 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTSDP07339 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSDP07339 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTSDP07339 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
CTSDP07339 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSDP07339 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CTSDP07339 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.45■□□□□ 0.22
CTSDP07339 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTSDP07339 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSDP07339 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSDP07339 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSDP07339 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSDP07339 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.45■□□□□ 0.22
CTSDP07339 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.45■□□□□ 0.22
CTSDP07339 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.45■□□□□ 0.22
CTSDP07339 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.45■□□□□ 0.22
CTSDP07339 AC142381.2-201ENST00000566120 298 ntBASIC16.45■□□□□ 0.22
CTSDP07339 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.45■□□□□ 0.22
CTSDP07339 AL356652.1-201ENST00000615962 565 ntBASIC16.45■□□□□ 0.22
CTSDP07339 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.45■□□□□ 0.22
CTSDP07339 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CTSDP07339 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CTSDP07339 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.45■□□□□ 0.22
CTSDP07339 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CTSDP07339 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CTSDP07339 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSDP07339 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CTSDP07339 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSDP07339 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSDP07339 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CTSDP07339 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.45■□□□□ 0.22
CTSDP07339 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSDP07339 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSDP07339 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.45■□□□□ 0.22
CTSDP07339 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSDP07339 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.45■□□□□ 0.22
CTSDP07339 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTSDP07339 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTSDP07339 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTSDP07339 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.44■□□□□ 0.22
CTSDP07339 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTSDP07339 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTSDP07339 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CTSDP07339 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTSDP07339 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTSDP07339 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CTSDP07339 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTSDP07339 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CTSDP07339 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CTSDP07339 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.44■□□□□ 0.22
CTSDP07339 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CTSDP07339 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTSDP07339 AC104187.1-201ENST00000607510 612 ntBASIC16.44■□□□□ 0.22
CTSDP07339 AL031432.3-201ENST00000607698 485 ntBASIC16.44■□□□□ 0.22
CTSDP07339 AC005837.3-201ENST00000612163 286 ntBASIC16.44■□□□□ 0.22
CTSDP07339 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.44■□□□□ 0.22
CTSDP07339 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CTSDP07339 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CTSDP07339 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CTSDP07339 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.44■□□□□ 0.22
CTSDP07339 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.44■□□□□ 0.22
CTSDP07339 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTSDP07339 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CTSDP07339 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CTSDP07339 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CTSDP07339 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTSDP07339 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTSDP07339 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms