Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TPM3P06753 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC22.21■■□□□ 1.15
TPM3P06753 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC22.21■■□□□ 1.15
TPM3P06753 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TPM3P06753 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC22.21■■□□□ 1.15
TPM3P06753 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TPM3P06753 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
TPM3P06753 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
TPM3P06753 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC22.21■■□□□ 1.15
TPM3P06753 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.15
TPM3P06753 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.15
TPM3P06753 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC22.2■■□□□ 1.14
TPM3P06753 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC22.2■■□□□ 1.14
TPM3P06753 LINC01465-201ENST00000408887 1940 ntBASIC22.2■■□□□ 1.14
TPM3P06753 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TPM3P06753 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
TPM3P06753 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TPM3P06753 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TPM3P06753 FAM21FP-204ENST00000608637 956 ntBASIC22.2■■□□□ 1.14
TPM3P06753 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.2■■□□□ 1.14
TPM3P06753 AC120498.9-201ENST00000339021 3867 ntBASIC22.2■■□□□ 1.14
TPM3P06753 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC22.2■■□□□ 1.14
TPM3P06753 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
TPM3P06753 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
TPM3P06753 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TPM3P06753 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC22.2■■□□□ 1.14
TPM3P06753 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC22.2■■□□□ 1.14
TPM3P06753 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
TPM3P06753 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TPM3P06753 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TPM3P06753 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TPM3P06753 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TPM3P06753 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC22.19■■□□□ 1.14
TPM3P06753 DUX4L2-201ENST00000561772 1275 ntBASIC22.19■■□□□ 1.14
TPM3P06753 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.19■■□□□ 1.14
TPM3P06753 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.19■■□□□ 1.14
TPM3P06753 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.19■■□□□ 1.14
TPM3P06753 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.19■■□□□ 1.14
TPM3P06753 DUX4L6-201ENST00000626483 1275 ntBASIC22.19■■□□□ 1.14
TPM3P06753 DUX4L1-201ENST00000627662 1275 ntBASIC22.19■■□□□ 1.14
TPM3P06753 DUX4L8-201ENST00000629013 1275 ntBASIC22.19■■□□□ 1.14
TPM3P06753 DUX4L3-201ENST00000630187 1275 ntBASIC22.19■■□□□ 1.14
TPM3P06753 DUX4L7-201ENST00000630678 1275 ntBASIC22.19■■□□□ 1.14
TPM3P06753 DUX4L5-201ENST00000630834 1275 ntBASIC22.19■■□□□ 1.14
TPM3P06753 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC22.19■■□□□ 1.14
TPM3P06753 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TPM3P06753 AC008406.3-201ENST00000620001 1374 ntBASIC22.19■■□□□ 1.14
TPM3P06753 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC22.19■■□□□ 1.14
TPM3P06753 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
TPM3P06753 BX119927.1-201ENST00000636596 1552 ntBASIC22.19■■□□□ 1.14
TPM3P06753 CD37-204ENST00000535669 1674 ntTSL 2 BASIC22.19■■□□□ 1.14
TPM3P06753 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.19■■□□□ 1.14
TPM3P06753 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
TPM3P06753 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TPM3P06753 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC22.19■■□□□ 1.14
TPM3P06753 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
TPM3P06753 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TPM3P06753 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TPM3P06753 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC22.18■■□□□ 1.14
TPM3P06753 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
TPM3P06753 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TPM3P06753 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TPM3P06753 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TPM3P06753 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
TPM3P06753 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC22.18■■□□□ 1.14
TPM3P06753 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TPM3P06753 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
TPM3P06753 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
TPM3P06753 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TPM3P06753 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
TPM3P06753 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TPM3P06753 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.18■■□□□ 1.14
TPM3P06753 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC22.18■■□□□ 1.14
TPM3P06753 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.18■■□□□ 1.14
TPM3P06753 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.18■■□□□ 1.14
TPM3P06753 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TPM3P06753 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
TPM3P06753 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TPM3P06753 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
TPM3P06753 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
TPM3P06753 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TPM3P06753 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC22.18■■□□□ 1.14
TPM3P06753 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC22.18■■□□□ 1.14
TPM3P06753 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
TPM3P06753 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TPM3P06753 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC22.17■■□□□ 1.14
TPM3P06753 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC22.17■■□□□ 1.14
TPM3P06753 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
TPM3P06753 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TPM3P06753 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TPM3P06753 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.17■■□□□ 1.14
TPM3P06753 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.17■■□□□ 1.14
TPM3P06753 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.17■■□□□ 1.14
TPM3P06753 AC131212.1-201ENST00000613771 668 ntBASIC22.17■■□□□ 1.14
TPM3P06753 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.17■■□□□ 1.14
TPM3P06753 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
TPM3P06753 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
TPM3P06753 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TPM3P06753 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC22.17■■□□□ 1.14
TPM3P06753 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms