Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.95■□□□□ 0.46
HMGN1P05114 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGN1P05114 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.95■□□□□ 0.46
HMGN1P05114 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGN1P05114 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGN1P05114 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGN1P05114 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.95■□□□□ 0.46
HMGN1P05114 HCG11-201ENST00000411553 5696 ntBASIC17.95■□□□□ 0.46
HMGN1P05114 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGN1P05114 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGN1P05114 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGN1P05114 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
HMGN1P05114 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
HMGN1P05114 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.94■□□□□ 0.46
HMGN1P05114 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGN1P05114 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.94■□□□□ 0.46
HMGN1P05114 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.94■□□□□ 0.46
HMGN1P05114 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HMGN1P05114 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGN1P05114 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGN1P05114 TERF1P5-201ENST00000477545 1207 ntBASIC17.94■□□□□ 0.46
HMGN1P05114 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HMGN1P05114 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.94■□□□□ 0.46
HMGN1P05114 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
HMGN1P05114 AL162412.1-201ENST00000567129 965 ntBASIC17.94■□□□□ 0.46
HMGN1P05114 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.94■□□□□ 0.46
HMGN1P05114 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HMGN1P05114 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HMGN1P05114 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.94■□□□□ 0.46
HMGN1P05114 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMGN1P05114 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGN1P05114 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMGN1P05114 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGN1P05114 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
HMGN1P05114 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGN1P05114 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.93■□□□□ 0.46
HMGN1P05114 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGN1P05114 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGN1P05114 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMGN1P05114 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGN1P05114 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGN1P05114 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGN1P05114 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
HMGN1P05114 AP001271.2-201ENST00000624018 1556 ntBASIC17.93■□□□□ 0.46
HMGN1P05114 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.93■□□□□ 0.46
HMGN1P05114 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.93■□□□□ 0.46
HMGN1P05114 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMGN1P05114 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.93■□□□□ 0.46
HMGN1P05114 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.93■□□□□ 0.46
HMGN1P05114 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
HMGN1P05114 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMGN1P05114 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGN1P05114 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMGN1P05114 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGN1P05114 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGN1P05114 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGN1P05114 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGN1P05114 PTBP1P-201ENST00000554374 1601 ntBASIC17.93■□□□□ 0.46
HMGN1P05114 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.93■□□□□ 0.46
HMGN1P05114 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
HMGN1P05114 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.93■□□□□ 0.46
HMGN1P05114 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGN1P05114 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMGN1P05114 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGN1P05114 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMGN1P05114 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGN1P05114 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.92■□□□□ 0.46
HMGN1P05114 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGN1P05114 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGN1P05114 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGN1P05114 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HMGN1P05114 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HMGN1P05114 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGN1P05114 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.92■□□□□ 0.46
HMGN1P05114 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HMGN1P05114 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGN1P05114 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGN1P05114 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGN1P05114 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.92■□□□□ 0.46
HMGN1P05114 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HMGN1P05114 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HMGN1P05114 AL031963.3-201ENST00000606441 850 ntBASIC17.92■□□□□ 0.46
HMGN1P05114 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HMGN1P05114 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
HMGN1P05114 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGN1P05114 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGN1P05114 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGN1P05114 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGN1P05114 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGN1P05114 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
HMGN1P05114 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGN1P05114 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGN1P05114 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.91■□□□□ 0.46
HMGN1P05114 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HMGN1P05114 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HMGN1P05114 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMGN1P05114 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGN1P05114 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.91■□□□□ 0.46
HMGN1P05114 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.91■□□□□ 0.46
HMGN1P05114 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms