Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DPB1P04440 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DPB1P04440 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DPB1P04440 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DPB1P04440 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
HLA-DPB1P04440 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DPB1P04440 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
HLA-DPB1P04440 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DPB1P04440 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.8■□□□□ 0.44
HLA-DPB1P04440 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.8■□□□□ 0.44
HLA-DPB1P04440 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DPB1P04440 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.8■□□□□ 0.44
HLA-DPB1P04440 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DPB1P04440 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DPB1P04440 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HLA-DPB1P04440 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.8■□□□□ 0.44
HLA-DPB1P04440 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DPB1P04440 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DPB1P04440 KRT16P2-201ENST00000414673 1423 ntBASIC17.8■□□□□ 0.44
HLA-DPB1P04440 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DPB1P04440 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DPB1P04440 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HLA-DPB1P04440 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPB1P04440 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.79■□□□□ 0.44
HLA-DPB1P04440 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPB1P04440 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPB1P04440 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPB1P04440 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPB1P04440 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
HLA-DPB1P04440 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPB1P04440 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPB1P04440 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
HLA-DPB1P04440 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPB1P04440 AC016769.1-201ENST00000409132 1010 ntBASIC17.79■□□□□ 0.44
HLA-DPB1P04440 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPB1P04440 KRT18P20-201ENST00000548986 1279 ntBASIC17.79■□□□□ 0.44
HLA-DPB1P04440 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.79■□□□□ 0.44
HLA-DPB1P04440 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.79■□□□□ 0.44
HLA-DPB1P04440 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
HLA-DPB1P04440 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPB1P04440 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
HLA-DPB1P04440 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPB1P04440 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.79■□□□□ 0.44
HLA-DPB1P04440 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
HLA-DPB1P04440 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.79■□□□□ 0.44
HLA-DPB1P04440 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPB1P04440 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPB1P04440 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPB1P04440 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPB1P04440 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HLA-DPB1P04440 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
HLA-DPB1P04440 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DPB1P04440 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.78■□□□□ 0.44
HLA-DPB1P04440 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DPB1P04440 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.78■□□□□ 0.44
HLA-DPB1P04440 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DPB1P04440 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
HLA-DPB1P04440 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DPB1P04440 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DPB1P04440 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
HLA-DPB1P04440 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.78■□□□□ 0.44
HLA-DPB1P04440 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DPB1P04440 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.78■□□□□ 0.44
HLA-DPB1P04440 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DPB1P04440 AC245052.3-201ENST00000450182 901 ntBASIC17.78■□□□□ 0.44
HLA-DPB1P04440 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DPB1P04440 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.78■□□□□ 0.44
HLA-DPB1P04440 AC022517.1-201ENST00000592429 346 ntBASIC17.78■□□□□ 0.44
HLA-DPB1P04440 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.78■□□□□ 0.44
HLA-DPB1P04440 RARRES2P11-201ENST00000635158 484 ntBASIC17.78■□□□□ 0.44
HLA-DPB1P04440 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
HLA-DPB1P04440 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DPB1P04440 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DPB1P04440 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DPB1P04440 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DPB1P04440 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DPB1P04440 BX119927.1-201ENST00000636596 1552 ntBASIC17.78■□□□□ 0.44
HLA-DPB1P04440 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DPB1P04440 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.78■□□□□ 0.44
HLA-DPB1P04440 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HLA-DPB1P04440 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DPB1P04440 DPP3P2-201ENST00000416030 1696 ntBASIC17.77■□□□□ 0.44
HLA-DPB1P04440 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DPB1P04440 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DPB1P04440 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DPB1P04440 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
HLA-DPB1P04440 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DPB1P04440 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DPB1P04440 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DPB1P04440 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DPB1P04440 AC116050.2-201ENST00000612102 1779 ntBASIC17.77■□□□□ 0.44
HLA-DPB1P04440 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DPB1P04440 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DPB1P04440 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.77■□□□□ 0.44
HLA-DPB1P04440 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DPB1P04440 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
HLA-DPB1P04440 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.77■□□□□ 0.44
HLA-DPB1P04440 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.77■□□□□ 0.44
HLA-DPB1P04440 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.77■□□□□ 0.44
HLA-DPB1P04440 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms