Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT4O95628 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT4O95628 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CNOT4O95628 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT4O95628 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT4O95628 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
CNOT4O95628 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.61■□□□□ 0.41
CNOT4O95628 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT4O95628 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT4O95628 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT4O95628 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT4O95628 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.61■□□□□ 0.41
CNOT4O95628 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.61■□□□□ 0.41
CNOT4O95628 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.61■□□□□ 0.41
CNOT4O95628 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT4O95628 AL121829.2-201ENST00000620908 328 ntBASIC17.61■□□□□ 0.41
CNOT4O95628 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.61■□□□□ 0.41
CNOT4O95628 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.61■□□□□ 0.41
CNOT4O95628 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT4O95628 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT4O95628 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.61■□□□□ 0.41
CNOT4O95628 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT4O95628 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.61■□□□□ 0.41
CNOT4O95628 DPP3P2-201ENST00000416030 1696 ntBASIC17.61■□□□□ 0.41
CNOT4O95628 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CNOT4O95628 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.61■□□□□ 0.41
CNOT4O95628 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT4O95628 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CNOT4O95628 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CNOT4O95628 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.6■□□□□ 0.41
CNOT4O95628 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CNOT4O95628 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT4O95628 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT4O95628 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.6■□□□□ 0.41
CNOT4O95628 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.6■□□□□ 0.41
CNOT4O95628 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.6■□□□□ 0.41
CNOT4O95628 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.6■□□□□ 0.41
CNOT4O95628 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.6■□□□□ 0.41
CNOT4O95628 RN7SL471P-201ENST00000580476 299 ntBASIC17.6■□□□□ 0.41
CNOT4O95628 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CNOT4O95628 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT4O95628 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CNOT4O95628 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT4O95628 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.6■□□□□ 0.41
CNOT4O95628 KRT16P6-202ENST00000425692 1426 ntBASIC17.6■□□□□ 0.41
CNOT4O95628 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT4O95628 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT4O95628 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.6■□□□□ 0.41
CNOT4O95628 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.6■□□□□ 0.41
CNOT4O95628 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNOT4O95628 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT4O95628 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CNOT4O95628 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT4O95628 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.59■□□□□ 0.41
CNOT4O95628 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT4O95628 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.59■□□□□ 0.41
CNOT4O95628 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT4O95628 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.59■□□□□ 0.41
CNOT4O95628 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT4O95628 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.59■□□□□ 0.41
CNOT4O95628 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.59■□□□□ 0.41
CNOT4O95628 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT4O95628 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT4O95628 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT4O95628 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT4O95628 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
CNOT4O95628 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT4O95628 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT4O95628 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
CNOT4O95628 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.59■□□□□ 0.41
CNOT4O95628 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT4O95628 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.59■□□□□ 0.41
CNOT4O95628 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT4O95628 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.59■□□□□ 0.41
CNOT4O95628 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CNOT4O95628 AL121906.2-201ENST00000621597 723 ntBASIC17.59■□□□□ 0.41
CNOT4O95628 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT4O95628 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT4O95628 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNOT4O95628 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.59■□□□□ 0.41
CNOT4O95628 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
CNOT4O95628 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CNOT4O95628 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.58■□□□□ 0.4
CNOT4O95628 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.58■□□□□ 0.4
CNOT4O95628 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.58■□□□□ 0.4
CNOT4O95628 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.58■□□□□ 0.4
CNOT4O95628 MTDHP1-201ENST00000605323 784 ntBASIC17.58■□□□□ 0.4
CNOT4O95628 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNOT4O95628 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CNOT4O95628 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNOT4O95628 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CNOT4O95628 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CNOT4O95628 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT4O95628 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.57■□□□□ 0.4
CNOT4O95628 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CNOT4O95628 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.57■□□□□ 0.4
CNOT4O95628 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.57■□□□□ 0.4
CNOT4O95628 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT4O95628 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT4O95628 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms