Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.9■□□□□ 0.78
RFPL1O75677 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
RFPL1O75677 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFPL1O75677 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
RFPL1O75677 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFPL1O75677 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
RFPL1O75677 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
RFPL1O75677 AC069152.1-201ENST00000438030 544 ntBASIC19.9■□□□□ 0.78
RFPL1O75677 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RFPL1O75677 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
RFPL1O75677 AC133041.1-202ENST00000642053 222 ntBASIC19.9■□□□□ 0.78
RFPL1O75677 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RFPL1O75677 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RFPL1O75677 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFPL1O75677 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RFPL1O75677 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RFPL1O75677 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFPL1O75677 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
RFPL1O75677 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFPL1O75677 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RFPL1O75677 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.9■□□□□ 0.78
RFPL1O75677 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
RFPL1O75677 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFPL1O75677 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFPL1O75677 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RFPL1O75677 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.89■□□□□ 0.77
RFPL1O75677 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
RFPL1O75677 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
RFPL1O75677 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.89■□□□□ 0.77
RFPL1O75677 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.89■□□□□ 0.77
RFPL1O75677 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.89■□□□□ 0.77
RFPL1O75677 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFPL1O75677 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RFPL1O75677 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFPL1O75677 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFPL1O75677 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFPL1O75677 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.88■□□□□ 0.77
RFPL1O75677 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RFPL1O75677 Z82202.1-201ENST00000623446 1880 ntBASIC19.88■□□□□ 0.77
RFPL1O75677 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RFPL1O75677 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFPL1O75677 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.88■□□□□ 0.77
RFPL1O75677 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFPL1O75677 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFPL1O75677 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
RFPL1O75677 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RFPL1O75677 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RFPL1O75677 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.88■□□□□ 0.77
RFPL1O75677 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.88■□□□□ 0.77
RFPL1O75677 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFPL1O75677 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.88■□□□□ 0.77
RFPL1O75677 FAM201B-201ENST00000458407 597 ntBASIC19.88■□□□□ 0.77
RFPL1O75677 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.88■□□□□ 0.77
RFPL1O75677 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RFPL1O75677 AC105036.2-201ENST00000569468 176 ntBASIC19.88■□□□□ 0.77
RFPL1O75677 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.88■□□□□ 0.77
RFPL1O75677 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.88■□□□□ 0.77
RFPL1O75677 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RFPL1O75677 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFPL1O75677 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFPL1O75677 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFPL1O75677 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFPL1O75677 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFPL1O75677 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.88■□□□□ 0.77
RFPL1O75677 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.87■□□□□ 0.77
RFPL1O75677 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFPL1O75677 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.87■□□□□ 0.77
RFPL1O75677 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFPL1O75677 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
RFPL1O75677 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFPL1O75677 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
RFPL1O75677 AC004408.2-201ENST00000623613 2777 ntBASIC19.87■□□□□ 0.77
RFPL1O75677 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
RFPL1O75677 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RFPL1O75677 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFPL1O75677 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.87■□□□□ 0.77
RFPL1O75677 AC133552.2-202ENST00000575694 574 ntBASIC19.87■□□□□ 0.77
RFPL1O75677 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.87■□□□□ 0.77
RFPL1O75677 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.87■□□□□ 0.77
RFPL1O75677 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFPL1O75677 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RFPL1O75677 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFPL1O75677 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.87■□□□□ 0.77
RFPL1O75677 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFPL1O75677 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.86■□□□□ 0.77
RFPL1O75677 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFPL1O75677 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFPL1O75677 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFPL1O75677 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RFPL1O75677 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFPL1O75677 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RFPL1O75677 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFPL1O75677 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.86■□□□□ 0.77
RFPL1O75677 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFPL1O75677 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFPL1O75677 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RFPL1O75677 CNN2P6-201ENST00000439038 900 ntBASIC19.86■□□□□ 0.77
RFPL1O75677 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
RFPL1O75677 AC010536.3-201ENST00000620306 533 ntBASIC19.86■□□□□ 0.77
RFPL1O75677 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms