Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GPC4O75487 AC104771.1-201ENST00000603335 964 ntBASIC19.86■□□□□ 0.77
GPC4O75487 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
GPC4O75487 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GPC4O75487 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GPC4O75487 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GPC4O75487 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
GPC4O75487 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
GPC4O75487 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GPC4O75487 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GPC4O75487 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.85■□□□□ 0.77
GPC4O75487 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
GPC4O75487 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.85■□□□□ 0.77
GPC4O75487 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
GPC4O75487 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.85■□□□□ 0.77
GPC4O75487 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GPC4O75487 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GPC4O75487 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GPC4O75487 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
GPC4O75487 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.85■□□□□ 0.77
GPC4O75487 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.85■□□□□ 0.77
GPC4O75487 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.85■□□□□ 0.77
GPC4O75487 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
GPC4O75487 AC092118.2-201ENST00000613495 667 ntBASIC19.85■□□□□ 0.77
GPC4O75487 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.85■□□□□ 0.77
GPC4O75487 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GPC4O75487 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GPC4O75487 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
GPC4O75487 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GPC4O75487 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GPC4O75487 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
GPC4O75487 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GPC4O75487 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
GPC4O75487 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.84■□□□□ 0.77
GPC4O75487 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
GPC4O75487 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
GPC4O75487 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GPC4O75487 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
GPC4O75487 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GPC4O75487 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.84■□□□□ 0.77
GPC4O75487 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GPC4O75487 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
GPC4O75487 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
GPC4O75487 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
GPC4O75487 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.84■□□□□ 0.77
GPC4O75487 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
GPC4O75487 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GPC4O75487 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GPC4O75487 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
GPC4O75487 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
GPC4O75487 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.83■□□□□ 0.77
GPC4O75487 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.83■□□□□ 0.77
GPC4O75487 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.83■□□□□ 0.77
GPC4O75487 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
GPC4O75487 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
GPC4O75487 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
GPC4O75487 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
GPC4O75487 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
GPC4O75487 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.83■□□□□ 0.77
GPC4O75487 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
GPC4O75487 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
GPC4O75487 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.83■□□□□ 0.77
GPC4O75487 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
GPC4O75487 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
GPC4O75487 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
GPC4O75487 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.83■□□□□ 0.77
GPC4O75487 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.83■□□□□ 0.76
GPC4O75487 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.83■□□□□ 0.76
GPC4O75487 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
GPC4O75487 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GPC4O75487 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.83■□□□□ 0.76
GPC4O75487 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.82■□□□□ 0.76
GPC4O75487 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GPC4O75487 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
GPC4O75487 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GPC4O75487 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GPC4O75487 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GPC4O75487 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GPC4O75487 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GPC4O75487 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
GPC4O75487 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
GPC4O75487 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.82■□□□□ 0.76
GPC4O75487 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
GPC4O75487 C2orf69P4-201ENST00000565394 541 ntBASIC19.82■□□□□ 0.76
GPC4O75487 AC142086.2-201ENST00000569753 217 ntBASIC19.82■□□□□ 0.76
GPC4O75487 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.82■□□□□ 0.76
GPC4O75487 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GPC4O75487 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GPC4O75487 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GPC4O75487 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
GPC4O75487 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GPC4O75487 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
GPC4O75487 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GPC4O75487 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GPC4O75487 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GPC4O75487 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GPC4O75487 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GPC4O75487 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GPC4O75487 ID1-201ENST00000376105 1233 ntBASIC19.81■□□□□ 0.76
GPC4O75487 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms