Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSNA1O43805 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSNA1O43805 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSNA1O43805 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSNA1O43805 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSNA1O43805 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.92■□□□□ 0.3
SSNA1O43805 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSNA1O43805 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSNA1O43805 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
SSNA1O43805 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.91■□□□□ 0.3
SSNA1O43805 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC16.91■□□□□ 0.3
SSNA1O43805 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSNA1O43805 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
SSNA1O43805 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.91■□□□□ 0.3
SSNA1O43805 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.91■□□□□ 0.3
SSNA1O43805 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SSNA1O43805 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSNA1O43805 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SSNA1O43805 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SSNA1O43805 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.91■□□□□ 0.3
SSNA1O43805 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
SSNA1O43805 OR2I1P-207ENST00000453522 948 ntBASIC16.91■□□□□ 0.3
SSNA1O43805 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SSNA1O43805 PVT1-219ENST00000523427 938 ntTSL 3 BASIC16.91■□□□□ 0.3
SSNA1O43805 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC16.91■□□□□ 0.3
SSNA1O43805 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSNA1O43805 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SSNA1O43805 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SSNA1O43805 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SSNA1O43805 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSNA1O43805 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.91■□□□□ 0.3
SSNA1O43805 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.91■□□□□ 0.3
SSNA1O43805 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SSNA1O43805 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSNA1O43805 AL133373.2-201ENST00000623187 2828 ntBASIC16.91■□□□□ 0.3
SSNA1O43805 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.91■□□□□ 0.3
SSNA1O43805 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSNA1O43805 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SSNA1O43805 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SSNA1O43805 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SSNA1O43805 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SSNA1O43805 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSNA1O43805 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSNA1O43805 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
SSNA1O43805 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSNA1O43805 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSNA1O43805 AL032819.2-201ENST00000624543 2162 ntBASIC16.9■□□□□ 0.3
SSNA1O43805 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SSNA1O43805 AC010980.1-201ENST00000587192 1142 ntBASIC16.9■□□□□ 0.3
SSNA1O43805 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
SSNA1O43805 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSNA1O43805 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SSNA1O43805 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSNA1O43805 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.9■□□□□ 0.3
SSNA1O43805 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SSNA1O43805 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSNA1O43805 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSNA1O43805 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSNA1O43805 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.9■□□□□ 0.3
SSNA1O43805 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSNA1O43805 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.89■□□□□ 0.3
SSNA1O43805 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSNA1O43805 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSNA1O43805 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SSNA1O43805 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSNA1O43805 FER1L4-210ENST00000615531 5998 ntBASIC16.89■□□□□ 0.29
SSNA1O43805 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSNA1O43805 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSNA1O43805 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SSNA1O43805 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSNA1O43805 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSNA1O43805 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SSNA1O43805 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC16.89■□□□□ 0.29
SSNA1O43805 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC16.89■□□□□ 0.29
SSNA1O43805 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SSNA1O43805 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.89■□□□□ 0.29
SSNA1O43805 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.89■□□□□ 0.29
SSNA1O43805 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.89■□□□□ 0.29
SSNA1O43805 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSNA1O43805 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSNA1O43805 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSNA1O43805 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSNA1O43805 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SSNA1O43805 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SSNA1O43805 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
SSNA1O43805 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSNA1O43805 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.88■□□□□ 0.29
SSNA1O43805 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SSNA1O43805 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SSNA1O43805 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSNA1O43805 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SSNA1O43805 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
SSNA1O43805 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC16.88■□□□□ 0.29
SSNA1O43805 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SSNA1O43805 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
SSNA1O43805 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SSNA1O43805 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.88■□□□□ 0.29
SSNA1O43805 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSNA1O43805 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSNA1O43805 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms