Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.26■□□□□ 0.99
SOX1O00570 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SOX1O00570 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.26■□□□□ 0.99
SOX1O00570 MIR3180-1-201ENST00000580374 94 ntBASIC21.26■□□□□ 0.99
SOX1O00570 MIR3180-3-201ENST00000584616 94 ntBASIC21.26■□□□□ 0.99
SOX1O00570 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SOX1O00570 AC022898.2-201ENST00000616822 1312 ntBASIC21.26■□□□□ 0.99
SOX1O00570 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SOX1O00570 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SOX1O00570 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.25■□□□□ 0.99
SOX1O00570 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SOX1O00570 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.25■□□□□ 0.99
SOX1O00570 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SOX1O00570 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SOX1O00570 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.25■□□□□ 0.99
SOX1O00570 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SOX1O00570 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.25■□□□□ 0.99
SOX1O00570 AL512604.3-201ENST00000569583 964 ntBASIC21.25■□□□□ 0.99
SOX1O00570 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SOX1O00570 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SOX1O00570 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.25■□□□□ 0.99
SOX1O00570 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
SOX1O00570 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SOX1O00570 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SOX1O00570 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SOX1O00570 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SOX1O00570 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SOX1O00570 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SOX1O00570 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SOX1O00570 KRT8P8-201ENST00000434750 1448 ntBASIC21.24■□□□□ 0.99
SOX1O00570 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SOX1O00570 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SOX1O00570 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SOX1O00570 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
SOX1O00570 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC21.24■□□□□ 0.99
SOX1O00570 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.24■□□□□ 0.99
SOX1O00570 AC106795.1-205ENST00000512851 1056 ntBASIC21.24■□□□□ 0.99
SOX1O00570 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.24■□□□□ 0.99
SOX1O00570 AL732292.2-201ENST00000609649 430 ntBASIC21.24■□□□□ 0.99
SOX1O00570 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SOX1O00570 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SOX1O00570 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SOX1O00570 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SOX1O00570 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.24■□□□□ 0.99
SOX1O00570 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SOX1O00570 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
SOX1O00570 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SOX1O00570 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SOX1O00570 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.23■□□□□ 0.99
SOX1O00570 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.23■□□□□ 0.99
SOX1O00570 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
SOX1O00570 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
SOX1O00570 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
SOX1O00570 AC120114.3-201ENST00000611923 658 ntBASIC21.23■□□□□ 0.99
SOX1O00570 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SOX1O00570 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.23■□□□□ 0.99
SOX1O00570 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SOX1O00570 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SOX1O00570 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.22■□□□□ 0.99
SOX1O00570 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SOX1O00570 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.22■□□□□ 0.99
SOX1O00570 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SOX1O00570 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.22■□□□□ 0.99
SOX1O00570 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC21.22■□□□□ 0.99
SOX1O00570 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SOX1O00570 TSPY17P-201ENST00000450329 467 ntBASIC21.22■□□□□ 0.99
SOX1O00570 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.22■□□□□ 0.99
SOX1O00570 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
SOX1O00570 AL353719.1-201ENST00000566847 864 ntBASIC21.22■□□□□ 0.99
SOX1O00570 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
SOX1O00570 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.22■□□□□ 0.99
SOX1O00570 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SOX1O00570 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
SOX1O00570 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SOX1O00570 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SOX1O00570 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.21■□□□□ 0.99
SOX1O00570 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SOX1O00570 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SOX1O00570 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SOX1O00570 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SOX1O00570 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SOX1O00570 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SOX1O00570 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.21■□□□□ 0.99
SOX1O00570 TEX30-205ENST00000376029 959 ntTSL 2 BASIC21.21■□□□□ 0.99
SOX1O00570 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SOX1O00570 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.21■□□□□ 0.99
SOX1O00570 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.21■□□□□ 0.99
SOX1O00570 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC21.21■□□□□ 0.99
SOX1O00570 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.21■□□□□ 0.99
SOX1O00570 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SOX1O00570 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.21■□□□□ 0.99
SOX1O00570 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SOX1O00570 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.21■□□□□ 0.99
SOX1O00570 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.21■□□□□ 0.99
SOX1O00570 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SOX1O00570 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SOX1O00570 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SOX1O00570 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SOX1O00570 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SOX1O00570 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms