Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDC7O00311 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.48■□□□□ 0.71
CDC7O00311 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDC7O00311 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.48■□□□□ 0.71
CDC7O00311 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.48■□□□□ 0.71
CDC7O00311 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.48■□□□□ 0.71
CDC7O00311 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDC7O00311 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDC7O00311 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
CDC7O00311 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDC7O00311 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDC7O00311 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDC7O00311 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CDC7O00311 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDC7O00311 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CDC7O00311 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDC7O00311 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDC7O00311 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.47■□□□□ 0.71
CDC7O00311 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDC7O00311 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDC7O00311 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDC7O00311 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDC7O00311 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CDC7O00311 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.47■□□□□ 0.71
CDC7O00311 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
CDC7O00311 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.47■□□□□ 0.71
CDC7O00311 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDC7O00311 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDC7O00311 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDC7O00311 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.47■□□□□ 0.71
CDC7O00311 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CDC7O00311 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDC7O00311 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDC7O00311 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CDC7O00311 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.47■□□□□ 0.71
CDC7O00311 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.47■□□□□ 0.71
CDC7O00311 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDC7O00311 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
CDC7O00311 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDC7O00311 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDC7O00311 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDC7O00311 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDC7O00311 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDC7O00311 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDC7O00311 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CDC7O00311 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDC7O00311 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDC7O00311 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDC7O00311 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDC7O00311 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CDC7O00311 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CDC7O00311 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.46■□□□□ 0.71
CDC7O00311 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.46■□□□□ 0.71
CDC7O00311 GUSBP6-202ENST00000438529 1198 ntBASIC19.46■□□□□ 0.71
CDC7O00311 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDC7O00311 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.46■□□□□ 0.71
CDC7O00311 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDC7O00311 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.46■□□□□ 0.71
CDC7O00311 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.46■□□□□ 0.71
CDC7O00311 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.45■□□□□ 0.7
CDC7O00311 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CDC7O00311 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC7O00311 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC7O00311 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC7O00311 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC7O00311 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CDC7O00311 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CDC7O00311 PHGDH-210ENST00000641115 1638 ntBASIC19.45■□□□□ 0.7
CDC7O00311 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDC7O00311 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.45■□□□□ 0.7
CDC7O00311 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC7O00311 DUSP5P2-201ENST00000426873 1033 ntBASIC19.45■□□□□ 0.7
CDC7O00311 NCF1B-203ENST00000435988 1254 ntBASIC19.45■□□□□ 0.7
CDC7O00311 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.45■□□□□ 0.7
CDC7O00311 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.45■□□□□ 0.7
CDC7O00311 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.45■□□□□ 0.7
CDC7O00311 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CDC7O00311 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.45■□□□□ 0.7
CDC7O00311 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.45■□□□□ 0.7
CDC7O00311 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CDC7O00311 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.45■□□□□ 0.7
CDC7O00311 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC7O00311 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.45■□□□□ 0.7
CDC7O00311 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.45■□□□□ 0.7
CDC7O00311 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC7O00311 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC7O00311 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.45■□□□□ 0.7
CDC7O00311 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDC7O00311 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC7O00311 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CDC7O00311 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC7O00311 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC7O00311 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDC7O00311 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC7O00311 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDC7O00311 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.44■□□□□ 0.7
CDC7O00311 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.44■□□□□ 0.7
CDC7O00311 TSPY6P-201ENST00000448518 926 ntBASIC19.44■□□□□ 0.7
CDC7O00311 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.44■□□□□ 0.7
CDC7O00311 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms