Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
CHKB-CPT1BH3BT56 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
CHKB-CPT1BH3BT56 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CHKB-CPT1BH3BT56 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CHKB-CPT1BH3BT56 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
CHKB-CPT1BH3BT56 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CHKB-CPT1BH3BT56 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CHKB-CPT1BH3BT56 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC11.06□□□□□ -0.64
CHKB-CPT1BH3BT56 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
CHKB-CPT1BH3BT56 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
CHKB-CPT1BH3BT56 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC11.06□□□□□ -0.64
CHKB-CPT1BH3BT56 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
CHKB-CPT1BH3BT56 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
CHKB-CPT1BH3BT56 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CHKB-CPT1BH3BT56 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CHKB-CPT1BH3BT56 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC11.06□□□□□ -0.64
CHKB-CPT1BH3BT56 AC104564.3-201ENST00000582367 638 ntBASIC11.06□□□□□ -0.64
CHKB-CPT1BH3BT56 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CHKB-CPT1BH3BT56 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC11.06□□□□□ -0.64
CHKB-CPT1BH3BT56 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC11.06□□□□□ -0.64
CHKB-CPT1BH3BT56 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CHKB-CPT1BH3BT56 AC093503.3-201ENST00000624917 2352 ntBASIC11.06□□□□□ -0.64
CHKB-CPT1BH3BT56 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CHKB-CPT1BH3BT56 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
CHKB-CPT1BH3BT56 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CHKB-CPT1BH3BT56 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
CHKB-CPT1BH3BT56 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CHKB-CPT1BH3BT56 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CHKB-CPT1BH3BT56 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CHKB-CPT1BH3BT56 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC11.06□□□□□ -0.64
CHKB-CPT1BH3BT56 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC11.06□□□□□ -0.64
CHKB-CPT1BH3BT56 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CHKB-CPT1BH3BT56 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
CHKB-CPT1BH3BT56 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
CHKB-CPT1BH3BT56 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC11.05□□□□□ -0.64
CHKB-CPT1BH3BT56 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CHKB-CPT1BH3BT56 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC11.05□□□□□ -0.64
CHKB-CPT1BH3BT56 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CHKB-CPT1BH3BT56 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CHKB-CPT1BH3BT56 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CHKB-CPT1BH3BT56 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CHKB-CPT1BH3BT56 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CHKB-CPT1BH3BT56 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
CHKB-CPT1BH3BT56 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
CHKB-CPT1BH3BT56 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC11.05□□□□□ -0.64
CHKB-CPT1BH3BT56 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CHKB-CPT1BH3BT56 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CHKB-CPT1BH3BT56 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CHKB-CPT1BH3BT56 PFN2-211ENST00000489155 636 ntTSL 4 BASIC11.05□□□□□ -0.64
CHKB-CPT1BH3BT56 HNRNPLP2-201ENST00000568980 1570 ntBASIC11.05□□□□□ -0.64
CHKB-CPT1BH3BT56 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC11.05□□□□□ -0.64
CHKB-CPT1BH3BT56 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
CHKB-CPT1BH3BT56 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC11.05□□□□□ -0.64
CHKB-CPT1BH3BT56 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
CHKB-CPT1BH3BT56 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC11.05□□□□□ -0.64
CHKB-CPT1BH3BT56 AC079598.2-202ENST00000546624 1451 ntBASIC11.05□□□□□ -0.64
CHKB-CPT1BH3BT56 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CHKB-CPT1BH3BT56 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CHKB-CPT1BH3BT56 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
CHKB-CPT1BH3BT56 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
CHKB-CPT1BH3BT56 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
CHKB-CPT1BH3BT56 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC11.04□□□□□ -0.64
CHKB-CPT1BH3BT56 ME2-216ENST00000639850 2331 ntTSL 5 BASIC11.04□□□□□ -0.64
CHKB-CPT1BH3BT56 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CHKB-CPT1BH3BT56 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC11.04□□□□□ -0.64
CHKB-CPT1BH3BT56 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC11.04□□□□□ -0.64
CHKB-CPT1BH3BT56 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CHKB-CPT1BH3BT56 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CHKB-CPT1BH3BT56 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CHKB-CPT1BH3BT56 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CHKB-CPT1BH3BT56 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CHKB-CPT1BH3BT56 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
CHKB-CPT1BH3BT56 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CHKB-CPT1BH3BT56 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
CHKB-CPT1BH3BT56 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC11.04□□□□□ -0.64
CHKB-CPT1BH3BT56 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CHKB-CPT1BH3BT56 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
CHKB-CPT1BH3BT56 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CHKB-CPT1BH3BT56 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
CHKB-CPT1BH3BT56 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC11.04□□□□□ -0.64
CHKB-CPT1BH3BT56 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CHKB-CPT1BH3BT56 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CHKB-CPT1BH3BT56 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC11.04□□□□□ -0.64
CHKB-CPT1BH3BT56 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CHKB-CPT1BH3BT56 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
CHKB-CPT1BH3BT56 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CHKB-CPT1BH3BT56 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CHKB-CPT1BH3BT56 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CHKB-CPT1BH3BT56 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CHKB-CPT1BH3BT56 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
CHKB-CPT1BH3BT56 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC11.04□□□□□ -0.64
CHKB-CPT1BH3BT56 LINC01960-201ENST00000563759 1884 ntBASIC11.04□□□□□ -0.64
CHKB-CPT1BH3BT56 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms