Protein–RNA interactions for Protein: B4DXG7

cDNA FLJ57652, highly similar to Ephrin-A3, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B4DXG7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
B4DXG7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.38■□□□□ 0.53
B4DXG7 AL512408.1-201ENST00000569378 2000 ntBASIC18.38■□□□□ 0.53
B4DXG7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.38■□□□□ 0.53
B4DXG7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
B4DXG7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
B4DXG7 SMG8-203ENST00000578922 2178 ntBASIC18.38■□□□□ 0.53
B4DXG7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
B4DXG7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
B4DXG7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
B4DXG7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
B4DXG7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.38■□□□□ 0.53
B4DXG7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.38■□□□□ 0.53
B4DXG7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
B4DXG7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
B4DXG7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.37■□□□□ 0.53
B4DXG7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.37■□□□□ 0.53
B4DXG7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
B4DXG7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
B4DXG7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
B4DXG7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
B4DXG7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.37■□□□□ 0.53
B4DXG7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.37■□□□□ 0.53
B4DXG7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
B4DXG7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.37■□□□□ 0.53
B4DXG7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
B4DXG7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.37■□□□□ 0.53
B4DXG7 AC092720.2-201ENST00000602388 1665 ntBASIC18.37■□□□□ 0.53
B4DXG7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.37■□□□□ 0.53
B4DXG7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
B4DXG7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.37■□□□□ 0.53
B4DXG7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
B4DXG7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
B4DXG7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
B4DXG7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
B4DXG7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.36■□□□□ 0.53
B4DXG7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
B4DXG7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.36■□□□□ 0.53
B4DXG7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
B4DXG7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
B4DXG7 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
B4DXG7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.36■□□□□ 0.53
B4DXG7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.36■□□□□ 0.53
B4DXG7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.36■□□□□ 0.53
B4DXG7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.36■□□□□ 0.53
B4DXG7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.36■□□□□ 0.53
B4DXG7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
B4DXG7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
B4DXG7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.36■□□□□ 0.53
B4DXG7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
B4DXG7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
B4DXG7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.35■□□□□ 0.53
B4DXG7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
B4DXG7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
B4DXG7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
B4DXG7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
B4DXG7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
B4DXG7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.35■□□□□ 0.53
B4DXG7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.35■□□□□ 0.53
B4DXG7 DPP3P2-201ENST00000416030 1696 ntBASIC18.35■□□□□ 0.53
B4DXG7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
B4DXG7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.35■□□□□ 0.53
B4DXG7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
B4DXG7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
B4DXG7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
B4DXG7 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
B4DXG7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
B4DXG7 RNA5SP413-201ENST00000516373 109 ntBASIC18.35■□□□□ 0.53
B4DXG7 CD99P1-205ENST00000527459 561 ntBASIC18.35■□□□□ 0.53
B4DXG7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
B4DXG7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.35■□□□□ 0.53
B4DXG7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.35■□□□□ 0.53
B4DXG7 HLA-B-256ENST00000639848 1089 ntBASIC18.35■□□□□ 0.53
B4DXG7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.35■□□□□ 0.53
B4DXG7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.35■□□□□ 0.53
B4DXG7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.35■□□□□ 0.53
B4DXG7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
B4DXG7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
B4DXG7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
B4DXG7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
B4DXG7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
B4DXG7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
B4DXG7 AC018445.3-201ENST00000624177 1945 ntBASIC18.34■□□□□ 0.53
B4DXG7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
B4DXG7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
B4DXG7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
B4DXG7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
B4DXG7 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.34■□□□□ 0.53
B4DXG7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.34■□□□□ 0.53
B4DXG7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
B4DXG7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.34■□□□□ 0.53
B4DXG7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
B4DXG7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
B4DXG7 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
B4DXG7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.33■□□□□ 0.53
B4DXG7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.33■□□□□ 0.53
B4DXG7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
B4DXG7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
B4DXG7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
B4DXG7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms