Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CDHR4A6H8M9 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDHR4A6H8M9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDHR4A6H8M9 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.25■□□□□ 0.51
CDHR4A6H8M9 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.25■□□□□ 0.51
CDHR4A6H8M9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDHR4A6H8M9 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDHR4A6H8M9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.24■□□□□ 0.51
CDHR4A6H8M9 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.24■□□□□ 0.51
CDHR4A6H8M9 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDHR4A6H8M9 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDHR4A6H8M9 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.24■□□□□ 0.51
CDHR4A6H8M9 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CDHR4A6H8M9 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.24■□□□□ 0.51
CDHR4A6H8M9 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.24■□□□□ 0.51
CDHR4A6H8M9 AC083906.2-201ENST00000511578 360 ntBASIC18.24■□□□□ 0.51
CDHR4A6H8M9 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CDHR4A6H8M9 AL121832.2-201ENST00000610979 668 ntBASIC18.24■□□□□ 0.51
CDHR4A6H8M9 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDHR4A6H8M9 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDHR4A6H8M9 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDHR4A6H8M9 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CDHR4A6H8M9 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDHR4A6H8M9 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDHR4A6H8M9 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.23■□□□□ 0.51
CDHR4A6H8M9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDHR4A6H8M9 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDHR4A6H8M9 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.23■□□□□ 0.51
CDHR4A6H8M9 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.23■□□□□ 0.51
CDHR4A6H8M9 PHGDH-210ENST00000641115 1638 ntBASIC18.23■□□□□ 0.51
CDHR4A6H8M9 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDHR4A6H8M9 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDHR4A6H8M9 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDHR4A6H8M9 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.23■□□□□ 0.51
CDHR4A6H8M9 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDHR4A6H8M9 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDHR4A6H8M9 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.23■□□□□ 0.51
CDHR4A6H8M9 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDHR4A6H8M9 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDHR4A6H8M9 TREX1-205ENST00000625293 1783 ntBASIC18.23■□□□□ 0.51
CDHR4A6H8M9 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDHR4A6H8M9 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDHR4A6H8M9 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDHR4A6H8M9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDHR4A6H8M9 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDHR4A6H8M9 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDHR4A6H8M9 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDHR4A6H8M9 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDHR4A6H8M9 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CDHR4A6H8M9 MIPEPP3-201ENST00000412105 444 ntBASIC18.23■□□□□ 0.51
CDHR4A6H8M9 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.23■□□□□ 0.51
CDHR4A6H8M9 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.23■□□□□ 0.51
CDHR4A6H8M9 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.23■□□□□ 0.51
CDHR4A6H8M9 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.23■□□□□ 0.51
CDHR4A6H8M9 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.23■□□□□ 0.51
CDHR4A6H8M9 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
CDHR4A6H8M9 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDHR4A6H8M9 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDHR4A6H8M9 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.23■□□□□ 0.51
CDHR4A6H8M9 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDHR4A6H8M9 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDHR4A6H8M9 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CDHR4A6H8M9 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.22■□□□□ 0.51
CDHR4A6H8M9 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDHR4A6H8M9 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDHR4A6H8M9 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.22■□□□□ 0.51
CDHR4A6H8M9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDHR4A6H8M9 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.22■□□□□ 0.51
CDHR4A6H8M9 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDHR4A6H8M9 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.22■□□□□ 0.51
CDHR4A6H8M9 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.22■□□□□ 0.51
CDHR4A6H8M9 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDHR4A6H8M9 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDHR4A6H8M9 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CDHR4A6H8M9 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CDHR4A6H8M9 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.22■□□□□ 0.51
CDHR4A6H8M9 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDHR4A6H8M9 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDHR4A6H8M9 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDHR4A6H8M9 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.22■□□□□ 0.51
CDHR4A6H8M9 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.22■□□□□ 0.51
CDHR4A6H8M9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CDHR4A6H8M9 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDHR4A6H8M9 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.22■□□□□ 0.51
CDHR4A6H8M9 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDHR4A6H8M9 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDHR4A6H8M9 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDHR4A6H8M9 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDHR4A6H8M9 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDHR4A6H8M9 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CDHR4A6H8M9 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CDHR4A6H8M9 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.21■□□□□ 0.51
CDHR4A6H8M9 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.21■□□□□ 0.51
CDHR4A6H8M9 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDHR4A6H8M9 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDHR4A6H8M9 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CDHR4A6H8M9 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDHR4A6H8M9 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDHR4A6H8M9 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDHR4A6H8M9 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms