Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV5-4A0A0C4DH59 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV5-4A0A0C4DH59 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV5-4A0A0C4DH59 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV5-4A0A0C4DH59 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.59■□□□□ 0.73
TRBV5-4A0A0C4DH59 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TRBV5-4A0A0C4DH59 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.59■□□□□ 0.73
TRBV5-4A0A0C4DH59 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV5-4A0A0C4DH59 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
TRBV5-4A0A0C4DH59 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV5-4A0A0C4DH59 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV5-4A0A0C4DH59 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV5-4A0A0C4DH59 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.59■□□□□ 0.73
TRBV5-4A0A0C4DH59 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TRBV5-4A0A0C4DH59 AL121906.2-201ENST00000621597 723 ntBASIC19.59■□□□□ 0.73
TRBV5-4A0A0C4DH59 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.59■□□□□ 0.73
TRBV5-4A0A0C4DH59 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV5-4A0A0C4DH59 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV5-4A0A0C4DH59 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV5-4A0A0C4DH59 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.59■□□□□ 0.73
TRBV5-4A0A0C4DH59 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV5-4A0A0C4DH59 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV5-4A0A0C4DH59 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV5-4A0A0C4DH59 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV5-4A0A0C4DH59 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV5-4A0A0C4DH59 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV5-4A0A0C4DH59 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TRBV5-4A0A0C4DH59 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TRBV5-4A0A0C4DH59 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.59■□□□□ 0.73
TRBV5-4A0A0C4DH59 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TRBV5-4A0A0C4DH59 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRBV5-4A0A0C4DH59 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
TRBV5-4A0A0C4DH59 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.58■□□□□ 0.73
TRBV5-4A0A0C4DH59 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TRBV5-4A0A0C4DH59 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRBV5-4A0A0C4DH59 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.58■□□□□ 0.73
TRBV5-4A0A0C4DH59 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRBV5-4A0A0C4DH59 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.58■□□□□ 0.72
TRBV5-4A0A0C4DH59 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.58■□□□□ 0.72
TRBV5-4A0A0C4DH59 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.58■□□□□ 0.72
TRBV5-4A0A0C4DH59 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
TRBV5-4A0A0C4DH59 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRBV5-4A0A0C4DH59 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRBV5-4A0A0C4DH59 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRBV5-4A0A0C4DH59 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV5-4A0A0C4DH59 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV5-4A0A0C4DH59 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV5-4A0A0C4DH59 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV5-4A0A0C4DH59 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TRBV5-4A0A0C4DH59 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TRBV5-4A0A0C4DH59 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV5-4A0A0C4DH59 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV5-4A0A0C4DH59 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV5-4A0A0C4DH59 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.57■□□□□ 0.72
TRBV5-4A0A0C4DH59 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.57■□□□□ 0.72
TRBV5-4A0A0C4DH59 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV5-4A0A0C4DH59 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.57■□□□□ 0.72
TRBV5-4A0A0C4DH59 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.57■□□□□ 0.72
TRBV5-4A0A0C4DH59 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.57■□□□□ 0.72
TRBV5-4A0A0C4DH59 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.57■□□□□ 0.72
TRBV5-4A0A0C4DH59 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.57■□□□□ 0.72
TRBV5-4A0A0C4DH59 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV5-4A0A0C4DH59 AFG3L1P-217ENST00000557444 2447 ntBASIC19.56■□□□□ 0.72
TRBV5-4A0A0C4DH59 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.56■□□□□ 0.72
TRBV5-4A0A0C4DH59 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV5-4A0A0C4DH59 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV5-4A0A0C4DH59 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV5-4A0A0C4DH59 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TRBV5-4A0A0C4DH59 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TRBV5-4A0A0C4DH59 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV5-4A0A0C4DH59 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.56■□□□□ 0.72
TRBV5-4A0A0C4DH59 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
TRBV5-4A0A0C4DH59 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.56■□□□□ 0.72
TRBV5-4A0A0C4DH59 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.56■□□□□ 0.72
TRBV5-4A0A0C4DH59 ESRRAP1-201ENST00000400596 1257 ntBASIC19.56■□□□□ 0.72
TRBV5-4A0A0C4DH59 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV5-4A0A0C4DH59 MIR4651-201ENST00000582622 73 ntBASIC19.56■□□□□ 0.72
TRBV5-4A0A0C4DH59 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.56■□□□□ 0.72
TRBV5-4A0A0C4DH59 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TRBV5-4A0A0C4DH59 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV5-4A0A0C4DH59 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV5-4A0A0C4DH59 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV5-4A0A0C4DH59 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TRBV5-4A0A0C4DH59 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
TRBV5-4A0A0C4DH59 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.56■□□□□ 0.72
TRBV5-4A0A0C4DH59 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV5-4A0A0C4DH59 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.56■□□□□ 0.72
TRBV5-4A0A0C4DH59 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV5-4A0A0C4DH59 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TRBV5-4A0A0C4DH59 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TRBV5-4A0A0C4DH59 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV5-4A0A0C4DH59 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.55■□□□□ 0.72
TRBV5-4A0A0C4DH59 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TRBV5-4A0A0C4DH59 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TRBV5-4A0A0C4DH59 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.55■□□□□ 0.72
TRBV5-4A0A0C4DH59 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV5-4A0A0C4DH59 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.55■□□□□ 0.72
TRBV5-4A0A0C4DH59 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.55■□□□□ 0.72
TRBV5-4A0A0C4DH59 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV5-4A0A0C4DH59 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms