Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV2A0A0B4J234 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC15□□□□□ -0.01
TRAV2A0A0B4J234 MAX-217ENST00000557277 728 ntTSL 3 BASIC15□□□□□ -0.01
TRAV2A0A0B4J234 AC005829.2-201ENST00000571422 1056 ntBASIC15□□□□□ -0.01
TRAV2A0A0B4J234 AC060766.5-201ENST00000590539 871 ntBASIC15□□□□□ -0.01
TRAV2A0A0B4J234 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC15□□□□□ -0.01
TRAV2A0A0B4J234 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TRAV2A0A0B4J234 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV2A0A0B4J234 MOK-233ENST00000524214 1539 ntTSL 2 BASIC15□□□□□ -0.01
TRAV2A0A0B4J234 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV2A0A0B4J234 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV2A0A0B4J234 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TRAV2A0A0B4J234 AL512408.1-201ENST00000569378 2000 ntBASIC15□□□□□ -0.01
TRAV2A0A0B4J234 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV2A0A0B4J234 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
TRAV2A0A0B4J234 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
TRAV2A0A0B4J234 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV2A0A0B4J234 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV2A0A0B4J234 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV2A0A0B4J234 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAV2A0A0B4J234 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TRAV2A0A0B4J234 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV2A0A0B4J234 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
TRAV2A0A0B4J234 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
TRAV2A0A0B4J234 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV2A0A0B4J234 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC14.99□□□□□ -0.01
TRAV2A0A0B4J234 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV2A0A0B4J234 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV2A0A0B4J234 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC14.99□□□□□ -0.01
TRAV2A0A0B4J234 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC14.99□□□□□ -0.01
TRAV2A0A0B4J234 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV2A0A0B4J234 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC14.99□□□□□ -0.01
TRAV2A0A0B4J234 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV2A0A0B4J234 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV2A0A0B4J234 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV2A0A0B4J234 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV2A0A0B4J234 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV2A0A0B4J234 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV2A0A0B4J234 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV2A0A0B4J234 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TRAV2A0A0B4J234 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TRAV2A0A0B4J234 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRAV2A0A0B4J234 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV2A0A0B4J234 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV2A0A0B4J234 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV2A0A0B4J234 SMG8-203ENST00000578922 2178 ntBASIC14.98□□□□□ -0.01
TRAV2A0A0B4J234 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TRAV2A0A0B4J234 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
TRAV2A0A0B4J234 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV2A0A0B4J234 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV2A0A0B4J234 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV2A0A0B4J234 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV2A0A0B4J234 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV2A0A0B4J234 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV2A0A0B4J234 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAV2A0A0B4J234 RER1-204ENST00000378518 522 ntTSL 3 BASIC14.98□□□□□ -0.01
TRAV2A0A0B4J234 AL355802.2-201ENST00000402069 882 ntBASIC14.98□□□□□ -0.01
TRAV2A0A0B4J234 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC14.98□□□□□ -0.01
TRAV2A0A0B4J234 GATS-209ENST00000454084 1030 ntTSL 3 BASIC14.98□□□□□ -0.01
TRAV2A0A0B4J234 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV2A0A0B4J234 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV2A0A0B4J234 EMC9-206ENST00000560403 872 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV2A0A0B4J234 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC14.98□□□□□ -0.01
TRAV2A0A0B4J234 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
TRAV2A0A0B4J234 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAV2A0A0B4J234 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
TRAV2A0A0B4J234 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV2A0A0B4J234 GOLGA2P11-201ENST00000562660 1621 ntBASIC14.98□□□□□ -0.01
TRAV2A0A0B4J234 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAV2A0A0B4J234 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV2A0A0B4J234 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV2A0A0B4J234 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRAV2A0A0B4J234 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV2A0A0B4J234 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRAV2A0A0B4J234 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV2A0A0B4J234 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TRAV2A0A0B4J234 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
TRAV2A0A0B4J234 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV2A0A0B4J234 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV2A0A0B4J234 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAV2A0A0B4J234 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV2A0A0B4J234 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV2A0A0B4J234 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAV2A0A0B4J234 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TRAV2A0A0B4J234 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV2A0A0B4J234 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV2A0A0B4J234 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
TRAV2A0A0B4J234 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAV2A0A0B4J234 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC14.97□□□□□ -0.01
TRAV2A0A0B4J234 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC14.97□□□□□ -0.01
TRAV2A0A0B4J234 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV2A0A0B4J234 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV2A0A0B4J234 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC14.97□□□□□ -0.01
TRAV2A0A0B4J234 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC14.97□□□□□ -0.01
TRAV2A0A0B4J234 AC083880.1-201ENST00000608266 535 ntBASIC14.97□□□□□ -0.01
TRAV2A0A0B4J234 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV2A0A0B4J234 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV2A0A0B4J234 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV2A0A0B4J234 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV2A0A0B4J234 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms