Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRGV5A0A0B4J1U4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.84■□□□□ 0.45
TRGV5A0A0B4J1U4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRGV5A0A0B4J1U4 AP002982.1-201ENST00000492365 877 ntBASIC17.84■□□□□ 0.45
TRGV5A0A0B4J1U4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.84■□□□□ 0.45
TRGV5A0A0B4J1U4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.84■□□□□ 0.45
TRGV5A0A0B4J1U4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRGV5A0A0B4J1U4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TRGV5A0A0B4J1U4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRGV5A0A0B4J1U4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRGV5A0A0B4J1U4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
TRGV5A0A0B4J1U4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRGV5A0A0B4J1U4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRGV5A0A0B4J1U4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRGV5A0A0B4J1U4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.83■□□□□ 0.45
TRGV5A0A0B4J1U4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRGV5A0A0B4J1U4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.83■□□□□ 0.45
TRGV5A0A0B4J1U4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TRGV5A0A0B4J1U4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TRGV5A0A0B4J1U4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.83■□□□□ 0.44
TRGV5A0A0B4J1U4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.83■□□□□ 0.44
TRGV5A0A0B4J1U4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.83■□□□□ 0.44
TRGV5A0A0B4J1U4 CD177P1-201ENST00000606252 935 ntBASIC17.83■□□□□ 0.44
TRGV5A0A0B4J1U4 AC073195.1-201ENST00000607241 877 ntBASIC17.83■□□□□ 0.44
TRGV5A0A0B4J1U4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRGV5A0A0B4J1U4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRGV5A0A0B4J1U4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRGV5A0A0B4J1U4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRGV5A0A0B4J1U4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRGV5A0A0B4J1U4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRGV5A0A0B4J1U4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.83■□□□□ 0.44
TRGV5A0A0B4J1U4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRGV5A0A0B4J1U4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.83■□□□□ 0.44
TRGV5A0A0B4J1U4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.83■□□□□ 0.44
TRGV5A0A0B4J1U4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRGV5A0A0B4J1U4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.82■□□□□ 0.44
TRGV5A0A0B4J1U4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.82■□□□□ 0.44
TRGV5A0A0B4J1U4 AC018553.1-201ENST00000616682 1458 ntBASIC17.82■□□□□ 0.44
TRGV5A0A0B4J1U4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRGV5A0A0B4J1U4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRGV5A0A0B4J1U4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRGV5A0A0B4J1U4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRGV5A0A0B4J1U4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRGV5A0A0B4J1U4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.82■□□□□ 0.44
TRGV5A0A0B4J1U4 AL355355.2-201ENST00000442321 338 ntBASIC17.82■□□□□ 0.44
TRGV5A0A0B4J1U4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.82■□□□□ 0.44
TRGV5A0A0B4J1U4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.82■□□□□ 0.44
TRGV5A0A0B4J1U4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRGV5A0A0B4J1U4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.82■□□□□ 0.44
TRGV5A0A0B4J1U4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.82■□□□□ 0.44
TRGV5A0A0B4J1U4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TRGV5A0A0B4J1U4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.82■□□□□ 0.44
TRGV5A0A0B4J1U4 AC026471.5-201ENST00000615068 467 ntBASIC17.82■□□□□ 0.44
TRGV5A0A0B4J1U4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.82■□□□□ 0.44
TRGV5A0A0B4J1U4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.82■□□□□ 0.44
TRGV5A0A0B4J1U4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.82■□□□□ 0.44
TRGV5A0A0B4J1U4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.82■□□□□ 0.44
TRGV5A0A0B4J1U4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRGV5A0A0B4J1U4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRGV5A0A0B4J1U4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRGV5A0A0B4J1U4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRGV5A0A0B4J1U4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRGV5A0A0B4J1U4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRGV5A0A0B4J1U4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TRGV5A0A0B4J1U4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRGV5A0A0B4J1U4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.81■□□□□ 0.44
TRGV5A0A0B4J1U4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.81■□□□□ 0.44
TRGV5A0A0B4J1U4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TRGV5A0A0B4J1U4 PHGDH-210ENST00000641115 1638 ntBASIC17.81■□□□□ 0.44
TRGV5A0A0B4J1U4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.81■□□□□ 0.44
TRGV5A0A0B4J1U4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRGV5A0A0B4J1U4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.81■□□□□ 0.44
TRGV5A0A0B4J1U4 FAM197Y1-201ENST00000421178 764 ntBASIC17.81■□□□□ 0.44
TRGV5A0A0B4J1U4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRGV5A0A0B4J1U4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TRGV5A0A0B4J1U4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
TRGV5A0A0B4J1U4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.81■□□□□ 0.44
TRGV5A0A0B4J1U4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.81■□□□□ 0.44
TRGV5A0A0B4J1U4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
TRGV5A0A0B4J1U4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.81■□□□□ 0.44
TRGV5A0A0B4J1U4 REXO1L12P-201ENST00000622156 912 ntBASIC17.81■□□□□ 0.44
TRGV5A0A0B4J1U4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRGV5A0A0B4J1U4 TFP1-202ENST00000475455 1573 ntBASIC17.81■□□□□ 0.44
TRGV5A0A0B4J1U4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRGV5A0A0B4J1U4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.81■□□□□ 0.44
TRGV5A0A0B4J1U4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRGV5A0A0B4J1U4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
TRGV5A0A0B4J1U4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.8■□□□□ 0.44
TRGV5A0A0B4J1U4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRGV5A0A0B4J1U4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRGV5A0A0B4J1U4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRGV5A0A0B4J1U4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRGV5A0A0B4J1U4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TRGV5A0A0B4J1U4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRGV5A0A0B4J1U4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.8■□□□□ 0.44
TRGV5A0A0B4J1U4 BX088651.1-201ENST00000540551 451 ntBASIC17.8■□□□□ 0.44
TRGV5A0A0B4J1U4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.8■□□□□ 0.44
TRGV5A0A0B4J1U4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.8■□□□□ 0.44
TRGV5A0A0B4J1U4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRGV5A0A0B4J1U4 AL353708.3-201ENST00000610272 989 ntBASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms