Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV7-1A0A0A6YYK4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV7-1A0A0A6YYK4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TRBV7-1A0A0A6YYK4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC15.43■□□□□ 0.06
TRBV7-1A0A0A6YYK4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC15.43■□□□□ 0.06
TRBV7-1A0A0A6YYK4 MYC-209ENST00000641252 345 ntBASIC15.43■□□□□ 0.06
TRBV7-1A0A0A6YYK4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBV7-1A0A0A6YYK4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV7-1A0A0A6YYK4 AC009237.14-201ENST00000609975 1594 ntBASIC15.43■□□□□ 0.06
TRBV7-1A0A0A6YYK4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV7-1A0A0A6YYK4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV7-1A0A0A6YYK4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TRBV7-1A0A0A6YYK4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV7-1A0A0A6YYK4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBV7-1A0A0A6YYK4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBV7-1A0A0A6YYK4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV7-1A0A0A6YYK4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV7-1A0A0A6YYK4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
TRBV7-1A0A0A6YYK4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV7-1A0A0A6YYK4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV7-1A0A0A6YYK4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV7-1A0A0A6YYK4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV7-1A0A0A6YYK4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC15.42■□□□□ 0.06
TRBV7-1A0A0A6YYK4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRBV7-1A0A0A6YYK4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV7-1A0A0A6YYK4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV7-1A0A0A6YYK4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC15.42■□□□□ 0.06
TRBV7-1A0A0A6YYK4 AC069152.1-201ENST00000438030 544 ntBASIC15.42■□□□□ 0.06
TRBV7-1A0A0A6YYK4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC15.42■□□□□ 0.06
TRBV7-1A0A0A6YYK4 AC142086.2-201ENST00000569753 217 ntBASIC15.42■□□□□ 0.06
TRBV7-1A0A0A6YYK4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV7-1A0A0A6YYK4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV7-1A0A0A6YYK4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV7-1A0A0A6YYK4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV7-1A0A0A6YYK4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV7-1A0A0A6YYK4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV7-1A0A0A6YYK4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV7-1A0A0A6YYK4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV7-1A0A0A6YYK4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
TRBV7-1A0A0A6YYK4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV7-1A0A0A6YYK4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV7-1A0A0A6YYK4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV7-1A0A0A6YYK4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV7-1A0A0A6YYK4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV7-1A0A0A6YYK4 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.42■□□□□ 0.06
TRBV7-1A0A0A6YYK4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV7-1A0A0A6YYK4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV7-1A0A0A6YYK4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV7-1A0A0A6YYK4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV7-1A0A0A6YYK4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC15.41■□□□□ 0.06
TRBV7-1A0A0A6YYK4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV7-1A0A0A6YYK4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TRBV7-1A0A0A6YYK4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV7-1A0A0A6YYK4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV7-1A0A0A6YYK4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV7-1A0A0A6YYK4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV7-1A0A0A6YYK4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV7-1A0A0A6YYK4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV7-1A0A0A6YYK4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC15.41■□□□□ 0.06
TRBV7-1A0A0A6YYK4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV7-1A0A0A6YYK4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV7-1A0A0A6YYK4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC15.41■□□□□ 0.06
TRBV7-1A0A0A6YYK4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TRBV7-1A0A0A6YYK4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TRBV7-1A0A0A6YYK4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC15.41■□□□□ 0.06
TRBV7-1A0A0A6YYK4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TRBV7-1A0A0A6YYK4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV7-1A0A0A6YYK4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV7-1A0A0A6YYK4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC15.41■□□□□ 0.06
TRBV7-1A0A0A6YYK4 SLC25A24-204ENST00000569674 2357 ntBASIC15.41■□□□□ 0.06
TRBV7-1A0A0A6YYK4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV7-1A0A0A6YYK4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV7-1A0A0A6YYK4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV7-1A0A0A6YYK4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV7-1A0A0A6YYK4 AC092368.3-202ENST00000574180 1591 ntBASIC15.41■□□□□ 0.06
TRBV7-1A0A0A6YYK4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV7-1A0A0A6YYK4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV7-1A0A0A6YYK4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV7-1A0A0A6YYK4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV7-1A0A0A6YYK4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV7-1A0A0A6YYK4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
TRBV7-1A0A0A6YYK4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV7-1A0A0A6YYK4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV7-1A0A0A6YYK4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV7-1A0A0A6YYK4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV7-1A0A0A6YYK4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV7-1A0A0A6YYK4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC15.4■□□□□ 0.06
TRBV7-1A0A0A6YYK4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV7-1A0A0A6YYK4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRBV7-1A0A0A6YYK4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV7-1A0A0A6YYK4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC15.4■□□□□ 0.06
TRBV7-1A0A0A6YYK4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV7-1A0A0A6YYK4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC15.4■□□□□ 0.06
TRBV7-1A0A0A6YYK4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRBV7-1A0A0A6YYK4 AC060766.5-201ENST00000590539 871 ntBASIC15.4■□□□□ 0.06
TRBV7-1A0A0A6YYK4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
TRBV7-1A0A0A6YYK4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC15.4■□□□□ 0.06
TRBV7-1A0A0A6YYK4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRBV7-1A0A0A6YYK4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC15.4■□□□□ 0.06
TRBV7-1A0A0A6YYK4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms