Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC008953.1-201ENST00000497334 318 ntBASIC6.06□□□□□ -1.44
CHD8Q9HCK8 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 AP000648.1-201ENST00000529682 397 ntBASIC6.06□□□□□ -1.44
CHD8Q9HCK8 TNC-210ENST00000535648 7508 ntTSL 5 BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 MIR3135A-201ENST00000578460 77 ntBASIC6.06□□□□□ -1.44
CHD8Q9HCK8 AL031601.1-201ENST00000605702 394 ntBASIC6.06□□□□□ -1.44
CHD8Q9HCK8 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 AC145138.1-201ENST00000512908 2851 ntBASIC6.06□□□□□ -1.44
CHD8Q9HCK8 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 NEDD1-201ENST00000266742 4046 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 AC022613.3-201ENST00000560740 1346 ntBASIC6.06□□□□□ -1.44
CHD8Q9HCK8 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 SDHDP6-201ENST00000414693 480 ntBASIC6.06□□□□□ -1.44
CHD8Q9HCK8 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 AC006463.2-201ENST00000473326 348 ntBASIC6.06□□□□□ -1.44
CHD8Q9HCK8 NATP-201ENST00000523491 878 ntBASIC6.06□□□□□ -1.44
CHD8Q9HCK8 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 AL392048.1-201ENST00000613946 534 ntBASIC6.06□□□□□ -1.44
CHD8Q9HCK8 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 KIF13A-203ENST00000378814 6924 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CHD8Q9HCK8 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 AC083806.2-201ENST00000617795 2685 ntBASIC6.05□□□□□ -1.44
CHD8Q9HCK8 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 IFIT2-202ENST00000611722 3038 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 ARHGAP32-206ENST00000527272 5289 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 GAPDHP24-201ENST00000328713 983 ntBASIC6.05□□□□□ -1.44
CHD8Q9HCK8 RNA5SP132-201ENST00000364725 118 ntBASIC6.05□□□□□ -1.44
CHD8Q9HCK8 EIF4EBP2P3-201ENST00000403144 334 ntBASIC6.05□□□□□ -1.44
CHD8Q9HCK8 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 AC245884.2-201ENST00000426257 404 ntBASIC6.05□□□□□ -1.44
CHD8Q9HCK8 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 CR383658.1-201ENST00000514609 734 ntBASIC6.05□□□□□ -1.44
CHD8Q9HCK8 RPL10P18-201ENST00000519384 309 ntBASIC6.05□□□□□ -1.44
CHD8Q9HCK8 RAB9BP1-201ENST00000519581 626 ntBASIC6.05□□□□□ -1.44
CHD8Q9HCK8 AC109635.6-201ENST00000525487 1113 ntBASIC6.05□□□□□ -1.44
CHD8Q9HCK8 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 MIR4646-201ENST00000580775 63 ntBASIC6.05□□□□□ -1.44
CHD8Q9HCK8 AC005277.2-201ENST00000617898 390 ntBASIC6.05□□□□□ -1.44
CHD8Q9HCK8 AC114980.1-201ENST00000505668 3157 ntBASIC6.05□□□□□ -1.44
CHD8Q9HCK8 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 AL365217.1-201ENST00000398578 2436 ntBASIC6.05□□□□□ -1.44
CHD8Q9HCK8 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 RUNX1T1-252ENST00000617740 7627 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 GSTO2-202ENST00000369707 6423 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 LINC02019-201ENST00000608605 2060 ntBASIC6.05□□□□□ -1.44
CHD8Q9HCK8 PSG10P-201ENST00000501199 1500 ntBASIC6.05□□□□□ -1.44
CHD8Q9HCK8 AL592429.1-201ENST00000403909 1473 ntBASIC6.05□□□□□ -1.44
CHD8Q9HCK8 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 DOCK1-206ENST00000623213 5761 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 RPL17P17-201ENST00000419491 557 ntBASIC6.05□□□□□ -1.44
CHD8Q9HCK8 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 RN7SL222P-201ENST00000476452 299 ntBASIC6.05□□□□□ -1.44
CHD8Q9HCK8 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 OR8G3P-201ENST00000533406 921 ntBASIC6.05□□□□□ -1.44
CHD8Q9HCK8 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 AP000919.1-201ENST00000582850 985 ntBASIC6.05□□□□□ -1.44
CHD8Q9HCK8 AC021766.1-201ENST00000624404 741 ntBASIC6.05□□□□□ -1.44
CHD8Q9HCK8 SERPINB11-209ENST00000624518 573 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 151.8 ms