Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
AP3S2P59780 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
AP3S2P59780 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
AP3S2P59780 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
AP3S2P59780 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.57□□□□□ -1.52
AP3S2P59780 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.57□□□□□ -1.52
AP3S2P59780 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.57□□□□□ -1.52
AP3S2P59780 AL022311.1-201ENST00000623726 19416 ntBASIC5.57□□□□□ -1.52
AP3S2P59780 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
AP3S2P59780 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.56□□□□□ -1.52
AP3S2P59780 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.56□□□□□ -1.52
AP3S2P59780 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.56□□□□□ -1.52
AP3S2P59780 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
AP3S2P59780 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
AP3S2P59780 CEP57L1-202ENST00000368968 1649 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
AP3S2P59780 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
AP3S2P59780 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
AP3S2P59780 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
AP3S2P59780 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
AP3S2P59780 IFT43-201ENST00000238628 816 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
AP3S2P59780 RNA5SP478-201ENST00000364657 115 ntBASIC5.56□□□□□ -1.52
AP3S2P59780 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
AP3S2P59780 AL390039.1-201ENST00000399148 611 ntBASIC5.56□□□□□ -1.52
AP3S2P59780 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC5.56□□□□□ -1.52
AP3S2P59780 EIF4A1P13-201ENST00000415667 230 ntBASIC5.56□□□□□ -1.52
AP3S2P59780 UBE2V1P14-201ENST00000415815 558 ntBASIC5.56□□□□□ -1.52
AP3S2P59780 AC007562.1-201ENST00000421819 517 ntBASIC5.56□□□□□ -1.52
AP3S2P59780 AC000362.1-201ENST00000433725 425 ntBASIC5.56□□□□□ -1.52
AP3S2P59780 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
AP3S2P59780 AC023274.2-201ENST00000445264 521 ntBASIC5.56□□□□□ -1.52
AP3S2P59780 AL161722.1-201ENST00000446972 1032 ntBASIC5.56□□□□□ -1.52
AP3S2P59780 AL354714.5-201ENST00000450131 590 ntBASIC5.56□□□□□ -1.52
AP3S2P59780 RN7SL221P-201ENST00000466190 281 ntBASIC5.56□□□□□ -1.52
AP3S2P59780 RN7SL58P-201ENST00000473445 294 ntBASIC5.56□□□□□ -1.52
AP3S2P59780 RPS26P6-201ENST00000475156 348 ntBASIC5.56□□□□□ -1.52
AP3S2P59780 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC5.56□□□□□ -1.52
AP3S2P59780 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.56□□□□□ -1.52
AP3S2P59780 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.56□□□□□ -1.52
AP3S2P59780 SNX18P23-201ENST00000510867 677 ntBASIC5.56□□□□□ -1.52
AP3S2P59780 ASNSP4-201ENST00000511103 447 ntBASIC5.56□□□□□ -1.52
AP3S2P59780 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC5.56□□□□□ -1.52
AP3S2P59780 AC100854.1-201ENST00000520351 341 ntBASIC5.56□□□□□ -1.52
AP3S2P59780 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.56□□□□□ -1.52
AP3S2P59780 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC5.56□□□□□ -1.52
AP3S2P59780 AC246817.2-201ENST00000523971 577 ntTSL 5 BASIC5.56□□□□□ -1.52
AP3S2P59780 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC5.56□□□□□ -1.52
AP3S2P59780 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.56□□□□□ -1.52
AP3S2P59780 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC5.56□□□□□ -1.52
AP3S2P59780 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
AP3S2P59780 AC233290.1-201ENST00000553021 1186 ntBASIC5.56□□□□□ -1.52
AP3S2P59780 AL162632.2-201ENST00000553933 399 ntBASIC5.56□□□□□ -1.52
AP3S2P59780 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
AP3S2P59780 AC010931.3-201ENST00000561647 554 ntTSL 3 BASIC5.56□□□□□ -1.52
AP3S2P59780 AC061975.4-201ENST00000578466 776 ntTSL 3 BASIC5.56□□□□□ -1.52
AP3S2P59780 AP000915.2-201ENST00000582120 454 ntTSL 3 BASIC5.56□□□□□ -1.52
AP3S2P59780 LINC01255-203ENST00000587189 591 ntTSL 4 BASIC5.56□□□□□ -1.52
AP3S2P59780 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
AP3S2P59780 5S_rRNA.23-201ENST00000612086 102 ntBASIC5.56□□□□□ -1.52
AP3S2P59780 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC5.56□□□□□ -1.52
AP3S2P59780 MIR6754-201ENST00000621121 66 ntBASIC5.56□□□□□ -1.52
AP3S2P59780 SNORA16A-202ENST00000628458 135 ntBASIC5.56□□□□□ -1.52
AP3S2P59780 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC5.56□□□□□ -1.52
AP3S2P59780 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC5.56□□□□□ -1.52
AP3S2P59780 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.56□□□□□ -1.52
AP3S2P59780 AC116667.2-201ENST00000641075 823 ntBASIC5.56□□□□□ -1.52
AP3S2P59780 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
AP3S2P59780 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
AP3S2P59780 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
AP3S2P59780 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.56□□□□□ -1.52
AP3S2P59780 EEF1A1P2-201ENST00000553854 1447 ntBASIC5.56□□□□□ -1.52
AP3S2P59780 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
AP3S2P59780 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
AP3S2P59780 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
AP3S2P59780 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
AP3S2P59780 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
AP3S2P59780 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
AP3S2P59780 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
AP3S2P59780 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC5.55□□□□□ -1.52
AP3S2P59780 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
AP3S2P59780 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.55□□□□□ -1.52
AP3S2P59780 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC5.55□□□□□ -1.52
AP3S2P59780 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
AP3S2P59780 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
AP3S2P59780 AC092692.1-201ENST00000623625 2595 ntBASIC5.55□□□□□ -1.52
AP3S2P59780 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.55□□□□□ -1.52
AP3S2P59780 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
AP3S2P59780 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.55□□□□□ -1.52
AP3S2P59780 SPATA20P1-201ENST00000423089 438 ntBASIC5.55□□□□□ -1.52
AP3S2P59780 AC007365.2-201ENST00000428806 458 ntBASIC5.55□□□□□ -1.52
AP3S2P59780 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
AP3S2P59780 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
AP3S2P59780 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
AP3S2P59780 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC5.55□□□□□ -1.52
AP3S2P59780 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.55□□□□□ -1.52
AP3S2P59780 AL021154.1-201ENST00000451217 456 ntTSL 3 BASIC5.55□□□□□ -1.52
AP3S2P59780 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.55□□□□□ -1.52
AP3S2P59780 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC5.55□□□□□ -1.52
AP3S2P59780 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.55□□□□□ -1.52
AP3S2P59780 RPLP0P1-201ENST00000457002 361 ntBASIC5.55□□□□□ -1.52
AP3S2P59780 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms