Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AC122713.2-201ENST00000624942 3335 ntBASIC7.42□□□□□ -1.22
CPT1AP50416 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.42□□□□□ -1.22
CPT1AP50416 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CPT1AP50416 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CPT1AP50416 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CPT1AP50416 SPATA31C2-201ENST00000324915 3777 ntBASIC7.42□□□□□ -1.22
CPT1AP50416 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.42□□□□□ -1.22
CPT1AP50416 AP002833.3-201ENST00000625075 2265 ntBASIC7.42□□□□□ -1.22
CPT1AP50416 RNA5SP433-201ENST00000364491 114 ntBASIC7.42□□□□□ -1.22
CPT1AP50416 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
CPT1AP50416 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CPT1AP50416 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CPT1AP50416 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.42□□□□□ -1.22
CPT1AP50416 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.42□□□□□ -1.22
CPT1AP50416 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC7.42□□□□□ -1.22
CPT1AP50416 TVP23CP1-201ENST00000450317 639 ntBASIC7.42□□□□□ -1.22
CPT1AP50416 AC007386.1-201ENST00000455212 582 ntBASIC7.42□□□□□ -1.22
CPT1AP50416 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC7.42□□□□□ -1.22
CPT1AP50416 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC7.42□□□□□ -1.22
CPT1AP50416 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CPT1AP50416 PVT1-214ENST00000522875 922 ntTSL 5 BASIC7.42□□□□□ -1.22
CPT1AP50416 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC7.42□□□□□ -1.22
CPT1AP50416 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC7.42□□□□□ -1.22
CPT1AP50416 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.42□□□□□ -1.22
CPT1AP50416 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC7.42□□□□□ -1.22
CPT1AP50416 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC7.42□□□□□ -1.22
CPT1AP50416 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC7.42□□□□□ -1.22
CPT1AP50416 AC005520.3-201ENST00000602874 370 ntBASIC7.42□□□□□ -1.22
CPT1AP50416 AC015849.6-201ENST00000605454 474 ntBASIC7.42□□□□□ -1.22
CPT1AP50416 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.42□□□□□ -1.22
CPT1AP50416 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC7.42□□□□□ -1.22
CPT1AP50416 AC091768.1-201ENST00000609258 930 ntBASIC7.42□□□□□ -1.22
CPT1AP50416 U1.41-201ENST00000617626 165 ntBASIC7.42□□□□□ -1.22
CPT1AP50416 AC243960.7-201ENST00000623532 707 ntBASIC7.42□□□□□ -1.22
CPT1AP50416 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC7.42□□□□□ -1.22
CPT1AP50416 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.42□□□□□ -1.22
CPT1AP50416 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CPT1AP50416 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
CPT1AP50416 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CPT1AP50416 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.42□□□□□ -1.22
CPT1AP50416 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CPT1AP50416 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CPT1AP50416 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CPT1AP50416 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CPT1AP50416 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CPT1AP50416 ASNSP6-201ENST00000592770 1618 ntBASIC7.41□□□□□ -1.22
CPT1AP50416 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CPT1AP50416 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CPT1AP50416 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CPT1AP50416 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CPT1AP50416 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CPT1AP50416 RACGAP1P-201ENST00000550663 1879 ntBASIC7.41□□□□□ -1.22
CPT1AP50416 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CPT1AP50416 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CPT1AP50416 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CPT1AP50416 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
CPT1AP50416 RN7SKP271-201ENST00000410528 320 ntBASIC7.41□□□□□ -1.22
CPT1AP50416 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC7.41□□□□□ -1.22
CPT1AP50416 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.41□□□□□ -1.22
CPT1AP50416 ATP5A1P8-201ENST00000423669 1291 ntBASIC7.41□□□□□ -1.22
CPT1AP50416 AC108479.1-201ENST00000431142 427 ntBASIC7.41□□□□□ -1.22
CPT1AP50416 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CPT1AP50416 BTBD7P2-201ENST00000441962 620 ntBASIC7.41□□□□□ -1.22
CPT1AP50416 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
CPT1AP50416 AL390728.3-201ENST00000452704 270 ntBASIC7.41□□□□□ -1.22
CPT1AP50416 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC7.41□□□□□ -1.22
CPT1AP50416 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC7.41□□□□□ -1.22
CPT1AP50416 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC7.41□□□□□ -1.22
CPT1AP50416 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC7.41□□□□□ -1.22
CPT1AP50416 SNRPGP1-201ENST00000553864 222 ntBASIC7.41□□□□□ -1.22
CPT1AP50416 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC7.41□□□□□ -1.22
CPT1AP50416 AC002519.2-203ENST00000567043 837 ntBASIC7.41□□□□□ -1.22
CPT1AP50416 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CPT1AP50416 MIR4502-201ENST00000580432 81 ntBASIC7.41□□□□□ -1.22
CPT1AP50416 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.41□□□□□ -1.22
CPT1AP50416 AC025262.3-201ENST00000623666 360 ntBASIC7.41□□□□□ -1.22
CPT1AP50416 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC7.41□□□□□ -1.22
CPT1AP50416 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CPT1AP50416 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CPT1AP50416 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CPT1AP50416 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CPT1AP50416 AC123769.2-201ENST00000624332 5984 ntBASIC7.41□□□□□ -1.22
CPT1AP50416 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
CPT1AP50416 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CPT1AP50416 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CPT1AP50416 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CPT1AP50416 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CPT1AP50416 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.4□□□□□ -1.22
CPT1AP50416 FLJ42393-201ENST00000623801 2270 ntBASIC7.4□□□□□ -1.22
CPT1AP50416 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC7.4□□□□□ -1.22
CPT1AP50416 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CPT1AP50416 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CPT1AP50416 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
CPT1AP50416 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC7.4□□□□□ -1.22
CPT1AP50416 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
CPT1AP50416 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
CPT1AP50416 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
CPT1AP50416 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CPT1AP50416 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CPT1AP50416 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms