Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 RN7SL475P-201ENST00000583379 298 ntBASIC6.39□□□□□ -1.39
RIF1Q5UIP0 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 SNORA70-201ENST00000384436 135 ntBASIC6.39□□□□□ -1.39
RIF1Q5UIP0 NPM1P4-201ENST00000414095 812 ntBASIC6.39□□□□□ -1.39
RIF1Q5UIP0 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 LSM3P3-201ENST00000436601 306 ntBASIC6.39□□□□□ -1.39
RIF1Q5UIP0 RN7SL834P-201ENST00000461450 286 ntBASIC6.39□□□□□ -1.39
RIF1Q5UIP0 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 AC146944.3-201ENST00000509969 371 ntBASIC6.39□□□□□ -1.39
RIF1Q5UIP0 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 AL355377.1-201ENST00000621125 1653 ntBASIC6.39□□□□□ -1.39
RIF1Q5UIP0 AIM2-202ENST00000368130 1529 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RIF1Q5UIP0 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RIF1Q5UIP0 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RIF1Q5UIP0 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
RIF1Q5UIP0 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RIF1Q5UIP0 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RIF1Q5UIP0 AL157702.1-201ENST00000398764 426 ntBASIC6.38□□□□□ -1.39
RIF1Q5UIP0 MIR1286-201ENST00000408112 78 ntBASIC6.38□□□□□ -1.39
RIF1Q5UIP0 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.38□□□□□ -1.39
RIF1Q5UIP0 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.38□□□□□ -1.39
RIF1Q5UIP0 GAPDHP33-201ENST00000443168 1013 ntBASIC6.38□□□□□ -1.39
RIF1Q5UIP0 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.38□□□□□ -1.39
RIF1Q5UIP0 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.38□□□□□ -1.39
RIF1Q5UIP0 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RIF1Q5UIP0 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
RIF1Q5UIP0 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RIF1Q5UIP0 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
RIF1Q5UIP0 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.38□□□□□ -1.39
RIF1Q5UIP0 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
RIF1Q5UIP0 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RIF1Q5UIP0 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
RIF1Q5UIP0 AC016582.1-202ENST00000636341 2982 ntBASIC6.38□□□□□ -1.39
RIF1Q5UIP0 ERVV-1-201ENST00000602168 2202 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
RIF1Q5UIP0 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC6.38□□□□□ -1.39
RIF1Q5UIP0 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
RIF1Q5UIP0 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
RIF1Q5UIP0 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.38□□□□□ -1.39
RIF1Q5UIP0 MELK-206ENST00000536329 2283 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RIF1Q5UIP0 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RIF1Q5UIP0 TMSB4XP2-201ENST00000335179 210 ntBASIC6.38□□□□□ -1.39
RIF1Q5UIP0 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RIF1Q5UIP0 RN7SKP296-201ENST00000411185 341 ntBASIC6.38□□□□□ -1.39
RIF1Q5UIP0 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC6.38□□□□□ -1.39
RIF1Q5UIP0 RPSAP37-201ENST00000470913 821 ntBASIC6.38□□□□□ -1.39
RIF1Q5UIP0 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RIF1Q5UIP0 RNA5SP434-201ENST00000516647 121 ntBASIC6.38□□□□□ -1.39
RIF1Q5UIP0 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.38□□□□□ -1.39
RIF1Q5UIP0 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC6.38□□□□□ -1.39
RIF1Q5UIP0 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RIF1Q5UIP0 LINC00410-201ENST00000419272 2018 ntTSL 2 BASIC6.38□□□□□ -1.39
RIF1Q5UIP0 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
RIF1Q5UIP0 SET-204ENST00000372692 2850 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RIF1Q5UIP0 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RIF1Q5UIP0 GPRC5D-AS1-202ENST00000499948 1746 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RIF1Q5UIP0 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.37□□□□□ -1.39
RIF1Q5UIP0 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
RIF1Q5UIP0 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RIF1Q5UIP0 PDE6A-204ENST00000613228 5398 ntTSL 5 BASIC6.37□□□□□ -1.39
RIF1Q5UIP0 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
RIF1Q5UIP0 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC6.37□□□□□ -1.39
RIF1Q5UIP0 AC103591.2-201ENST00000265259 766 ntBASIC6.37□□□□□ -1.39
RIF1Q5UIP0 RNA5SP375-201ENST00000362975 119 ntBASIC6.37□□□□□ -1.39
RIF1Q5UIP0 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC6.37□□□□□ -1.39
RIF1Q5UIP0 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.37□□□□□ -1.39
RIF1Q5UIP0 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.37□□□□□ -1.39
RIF1Q5UIP0 SDHDP6-201ENST00000414693 480 ntBASIC6.37□□□□□ -1.39
RIF1Q5UIP0 RPL17P17-201ENST00000419491 557 ntBASIC6.37□□□□□ -1.39
RIF1Q5UIP0 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.37□□□□□ -1.39
RIF1Q5UIP0 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC6.37□□□□□ -1.39
RIF1Q5UIP0 AC010323.2-201ENST00000596405 594 ntBASIC6.37□□□□□ -1.39
RIF1Q5UIP0 AC073342.3-201ENST00000624211 193 ntBASIC6.37□□□□□ -1.39
RIF1Q5UIP0 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RIF1Q5UIP0 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC6.37□□□□□ -1.39
RIF1Q5UIP0 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
RIF1Q5UIP0 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms