Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC9.11□□□□□ -0.95
LRCH3Q96II8 FRG2IP-201ENST00000563581 781 ntBASIC9.11□□□□□ -0.95
LRCH3Q96II8 AC011193.2-201ENST00000582638 367 ntBASIC9.11□□□□□ -0.95
LRCH3Q96II8 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC9.11□□□□□ -0.95
LRCH3Q96II8 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC9.11□□□□□ -0.95
LRCH3Q96II8 VN1R79P-201ENST00000593540 513 ntBASIC9.11□□□□□ -0.95
LRCH3Q96II8 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC9.11□□□□□ -0.95
LRCH3Q96II8 IGKV3OR2-5-201ENST00000605851 281 ntBASIC9.11□□□□□ -0.95
LRCH3Q96II8 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
LRCH3Q96II8 AL133370.2-201ENST00000619934 439 ntBASIC9.11□□□□□ -0.95
LRCH3Q96II8 AL138693.1-201ENST00000622219 129 ntBASIC9.11□□□□□ -0.95
LRCH3Q96II8 AC073348.1-201ENST00000623002 331 ntBASIC9.11□□□□□ -0.95
LRCH3Q96II8 AC241377.2-202ENST00000636462 997 ntBASIC9.11□□□□□ -0.95
LRCH3Q96II8 SCRN1-201ENST00000242059 5257 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LRCH3Q96II8 SCRN1-206ENST00000426154 5275 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
LRCH3Q96II8 OSBPL3-202ENST00000396429 2707 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
LRCH3Q96II8 ZKSCAN1-201ENST00000324306 9418 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LRCH3Q96II8 FAM26E-201ENST00000368599 9784 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LRCH3Q96II8 AC010997.6-201ENST00000623230 1645 ntBASIC9.11□□□□□ -0.95
LRCH3Q96II8 SLC9B2-201ENST00000362026 2300 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LRCH3Q96II8 AC016205.1-201ENST00000591629 2306 ntTSL 2 BASIC9.11□□□□□ -0.95
LRCH3Q96II8 BUB1-212ENST00000535254 3576 ntTSL 2 BASIC9.11□□□□□ -0.95
LRCH3Q96II8 MAPK10-202ENST00000359221 2668 ntTSL 5 BASIC9.11□□□□□ -0.95
LRCH3Q96II8 USP46-207ENST00000508499 1419 ntTSL 2 BASIC9.11□□□□□ -0.95
LRCH3Q96II8 SBF2-201ENST00000256190 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LRCH3Q96II8 ELP2-203ENST00000358232 8459 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LRCH3Q96II8 LINC00943-203ENST00000535544 2815 ntTSL 2 BASIC9.11□□□□□ -0.95
LRCH3Q96II8 NLRP4-201ENST00000301295 3670 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LRCH3Q96II8 GRB10-204ENST00000398812 4705 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LRCH3Q96II8 NOS2-201ENST00000313735 4176 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LRCH3Q96II8 FAM126A-202ENST00000409923 3130 ntTSL 5 BASIC9.11□□□□□ -0.95
LRCH3Q96II8 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
LRCH3Q96II8 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC9.11□□□□□ -0.95
LRCH3Q96II8 CHRM2-202ENST00000401861 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LRCH3Q96II8 HIVEP2-201ENST00000012134 9755 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
LRCH3Q96II8 AC139495.3-201ENST00000515156 4437 ntBASIC9.11□□□□□ -0.95
LRCH3Q96II8 RND3-203ENST00000409557 2372 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
LRCH3Q96II8 SFR1-202ENST00000369729 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
LRCH3Q96II8 FMO9P-202ENST00000488458 1535 ntBASIC9.1□□□□□ -0.95
LRCH3Q96II8 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 EFTUD2-201ENST00000402521 3045 ntTSL 2 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
LRCH3Q96II8 LINC01725-205ENST00000457273 1991 ntTSL 2 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 ZNF620-201ENST00000314529 3291 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LRCH3Q96II8 AL353795.3-201ENST00000624351 5702 ntBASIC9.1□□□□□ -0.95
LRCH3Q96II8 CELF2-215ENST00000636488 3908 ntTSL 5 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 RPGRIP1L-210ENST00000568653 2429 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
LRCH3Q96II8 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 COPB1-202ENST00000439561 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LRCH3Q96II8 AL662907.3-201ENST00000641271 1932 ntBASIC9.1□□□□□ -0.95
LRCH3Q96II8 SERPINB12-201ENST00000269491 1218 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LRCH3Q96II8 MORN3-201ENST00000355329 3803 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LRCH3Q96II8 RNU6-560P-201ENST00000364007 108 ntBASIC9.1□□□□□ -0.95
LRCH3Q96II8 Y_RNA.279-201ENST00000364763 95 ntBASIC9.1□□□□□ -0.95
LRCH3Q96II8 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 AC007068.1-201ENST00000396690 844 ntBASIC9.1□□□□□ -0.95
LRCH3Q96II8 RN7SKP110-201ENST00000410146 285 ntBASIC9.1□□□□□ -0.95
LRCH3Q96II8 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
LRCH3Q96II8 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 RPS7P8-201ENST00000418311 581 ntBASIC9.1□□□□□ -0.95
LRCH3Q96II8 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 GAPDHP69-201ENST00000425504 1008 ntBASIC9.1□□□□□ -0.95
LRCH3Q96II8 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 AC009299.1-201ENST00000429684 717 ntBASIC9.1□□□□□ -0.95
LRCH3Q96II8 FECHP1-201ENST00000431896 1214 ntBASIC9.1□□□□□ -0.95
LRCH3Q96II8 TMX2P1-201ENST00000436507 708 ntBASIC9.1□□□□□ -0.95
LRCH3Q96II8 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 AL034397.1-201ENST00000456392 908 ntBASIC9.1□□□□□ -0.95
LRCH3Q96II8 PRKAG2-AS1-201ENST00000464464 382 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
LRCH3Q96II8 AC091959.2-201ENST00000477363 321 ntBASIC9.1□□□□□ -0.95
LRCH3Q96II8 HNRNPA1P20-201ENST00000484852 955 ntBASIC9.1□□□□□ -0.95
LRCH3Q96II8 AC022973.1-201ENST00000490340 575 ntBASIC9.1□□□□□ -0.95
LRCH3Q96II8 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 LINC00491-201ENST00000505527 722 ntTSL 3 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 AC111000.3-201ENST00000508057 576 ntBASIC9.1□□□□□ -0.95
LRCH3Q96II8 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 NR1I3-234ENST00000515621 1130 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
LRCH3Q96II8 RN7SKP141-201ENST00000516167 338 ntBASIC9.1□□□□□ -0.95
LRCH3Q96II8 ZNF345-205ENST00000526123 458 ntTSL 3 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 ATP5J2P4-201ENST00000538774 267 ntBASIC9.1□□□□□ -0.95
LRCH3Q96II8 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
LRCH3Q96II8 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 AC025198.1-201ENST00000578331 419 ntBASIC9.1□□□□□ -0.95
LRCH3Q96II8 RN7SL785P-201ENST00000578437 253 ntBASIC9.1□□□□□ -0.95
LRCH3Q96II8 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 TBX18-AS1-208ENST00000591225 762 ntTSL 5 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 ZNF83-209ENST00000596930 560 ntTSL 4 BASIC9.1□□□□□ -0.95
LRCH3Q96II8 AC090425.1-201ENST00000610007 140 ntBASIC9.1□□□□□ -0.95
LRCH3Q96II8 MIR6780B-201ENST00000610307 79 ntBASIC9.1□□□□□ -0.95
LRCH3Q96II8 AL359535.1-201ENST00000612100 1087 ntBASIC9.1□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms