Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
ATP7AQ04656 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
ATP7AQ04656 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC9.52□□□□□ -0.89
ATP7AQ04656 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
ATP7AQ04656 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
ATP7AQ04656 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC9.52□□□□□ -0.89
ATP7AQ04656 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC9.52□□□□□ -0.89
ATP7AQ04656 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
ATP7AQ04656 USP48-203ENST00000374732 3037 ntTSL 2 BASIC9.51□□□□□ -0.89
ATP7AQ04656 MIR323A-201ENST00000362199 86 ntBASIC9.51□□□□□ -0.89
ATP7AQ04656 AL353662.1-201ENST00000439099 327 ntBASIC9.51□□□□□ -0.89
ATP7AQ04656 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC9.51□□□□□ -0.89
ATP7AQ04656 RPL34P33-201ENST00000486062 334 ntBASIC9.51□□□□□ -0.89
ATP7AQ04656 RN7SL193P-201ENST00000491708 276 ntBASIC9.51□□□□□ -0.89
ATP7AQ04656 RPS4XP14-201ENST00000493072 781 ntBASIC9.51□□□□□ -0.89
ATP7AQ04656 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
ATP7AQ04656 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC9.51□□□□□ -0.89
ATP7AQ04656 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC9.51□□□□□ -0.89
ATP7AQ04656 AP003396.4-201ENST00000527574 265 ntBASIC9.51□□□□□ -0.89
ATP7AQ04656 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC9.51□□□□□ -0.89
ATP7AQ04656 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC9.51□□□□□ -0.89
ATP7AQ04656 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC9.51□□□□□ -0.89
ATP7AQ04656 AC090236.2-201ENST00000587933 1101 ntBASIC9.51□□□□□ -0.89
ATP7AQ04656 AC005332.4-201ENST00000592752 579 ntBASIC9.51□□□□□ -0.89
ATP7AQ04656 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC9.51□□□□□ -0.89
ATP7AQ04656 AC127024.6-201ENST00000621598 424 ntBASIC9.51□□□□□ -0.89
ATP7AQ04656 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC9.51□□□□□ -0.89
ATP7AQ04656 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC9.51□□□□□ -0.89
ATP7AQ04656 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC9.51□□□□□ -0.89
ATP7AQ04656 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
ATP7AQ04656 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
ATP7AQ04656 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC9.51□□□□□ -0.89
ATP7AQ04656 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
ATP7AQ04656 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
ATP7AQ04656 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
ATP7AQ04656 AC073065.1-201ENST00000411678 2866 ntBASIC9.51□□□□□ -0.89
ATP7AQ04656 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC9.51□□□□□ -0.89
ATP7AQ04656 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
ATP7AQ04656 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
ATP7AQ04656 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC9.51□□□□□ -0.89
ATP7AQ04656 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC9.51□□□□□ -0.89
ATP7AQ04656 PCBP2P1-201ENST00000437262 977 ntBASIC9.51□□□□□ -0.89
ATP7AQ04656 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
ATP7AQ04656 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC9.51□□□□□ -0.89
ATP7AQ04656 RNA5SP438-201ENST00000516561 112 ntBASIC9.51□□□□□ -0.89
ATP7AQ04656 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC9.51□□□□□ -0.89
ATP7AQ04656 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
ATP7AQ04656 MAGEB16-205ENST00000399992 1734 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
ATP7AQ04656 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
ATP7AQ04656 AL080317.3-201ENST00000607434 4315 ntBASIC9.5□□□□□ -0.89
ATP7AQ04656 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
ATP7AQ04656 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
ATP7AQ04656 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
ATP7AQ04656 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.89
ATP7AQ04656 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
ATP7AQ04656 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
ATP7AQ04656 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
ATP7AQ04656 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC9.5□□□□□ -0.89
ATP7AQ04656 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
ATP7AQ04656 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
ATP7AQ04656 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
ATP7AQ04656 SNORA21-201ENST00000362423 132 ntBASIC9.5□□□□□ -0.89
ATP7AQ04656 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
ATP7AQ04656 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
ATP7AQ04656 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC9.5□□□□□ -0.89
ATP7AQ04656 RN7SL717P-201ENST00000478343 297 ntBASIC9.5□□□□□ -0.89
ATP7AQ04656 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC9.5□□□□□ -0.89
ATP7AQ04656 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC9.5□□□□□ -0.89
ATP7AQ04656 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC9.5□□□□□ -0.89
ATP7AQ04656 OR7E18P-201ENST00000592589 702 ntBASIC9.5□□□□□ -0.89
ATP7AQ04656 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC9.5□□□□□ -0.89
ATP7AQ04656 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC9.5□□□□□ -0.89
ATP7AQ04656 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC9.49□□□□□ -0.89
ATP7AQ04656 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC9.49□□□□□ -0.89
ATP7AQ04656 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
ATP7AQ04656 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
ATP7AQ04656 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC9.49□□□□□ -0.89
ATP7AQ04656 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC9.49□□□□□ -0.89
ATP7AQ04656 AC011447.6-201ENST00000623510 2598 ntBASIC9.49□□□□□ -0.89
ATP7AQ04656 USP40-202ENST00000409945 1946 ntTSL 2 BASIC9.49□□□□□ -0.89
ATP7AQ04656 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC9.49□□□□□ -0.89
ATP7AQ04656 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC9.49□□□□□ -0.89
ATP7AQ04656 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC9.49□□□□□ -0.89
ATP7AQ04656 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
ATP7AQ04656 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
ATP7AQ04656 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
ATP7AQ04656 TMSB4XP2-201ENST00000335179 210 ntBASIC9.49□□□□□ -0.89
ATP7AQ04656 RNFT1P3-201ENST00000340898 1052 ntBASIC9.49□□□□□ -0.89
ATP7AQ04656 NDUFS5P5-201ENST00000437256 321 ntBASIC9.49□□□□□ -0.89
ATP7AQ04656 AL355355.1-201ENST00000442900 793 ntBASIC9.49□□□□□ -0.89
ATP7AQ04656 AC005077.1-201ENST00000449226 375 ntBASIC9.49□□□□□ -0.89
ATP7AQ04656 AC074386.1-201ENST00000476560 767 ntBASIC9.49□□□□□ -0.89
ATP7AQ04656 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC9.49□□□□□ -0.89
ATP7AQ04656 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC9.49□□□□□ -0.89
ATP7AQ04656 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC9.49□□□□□ -0.89
ATP7AQ04656 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC9.49□□□□□ -0.89
ATP7AQ04656 AC012653.2-201ENST00000621880 420 ntBASIC9.49□□□□□ -0.89
ATP7AQ04656 AC105342.1-201ENST00000378334 6848 ntBASIC9.49□□□□□ -0.89
ATP7AQ04656 TLN2-211ENST00000636159 7441 ntTSL 5 BASIC9.49□□□□□ -0.89
ATP7AQ04656 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms