Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 RNA5SP485-201ENST00000365053 119 ntBASIC7.13□□□□□ -1.27
NXF3Q9H4D5 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 RN7SKP86-201ENST00000410454 332 ntBASIC7.13□□□□□ -1.27
NXF3Q9H4D5 AC008753.1-201ENST00000423096 284 ntBASIC7.13□□□□□ -1.27
NXF3Q9H4D5 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 AC007383.1-201ENST00000445875 636 ntBASIC7.13□□□□□ -1.27
NXF3Q9H4D5 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 RN7SL561P-201ENST00000488553 281 ntBASIC7.13□□□□□ -1.27
NXF3Q9H4D5 RPL37P23-201ENST00000492641 294 ntBASIC7.13□□□□□ -1.27
NXF3Q9H4D5 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 AC092375.1-201ENST00000550410 637 ntBASIC7.13□□□□□ -1.27
NXF3Q9H4D5 RPL3P13-201ENST00000550415 216 ntBASIC7.13□□□□□ -1.27
NXF3Q9H4D5 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 AL356986.1-201ENST00000604085 341 ntBASIC7.13□□□□□ -1.27
NXF3Q9H4D5 IGKV2OR2-10-201ENST00000613976 311 ntBASIC7.13□□□□□ -1.27
NXF3Q9H4D5 AL122023.1-201ENST00000622847 530 ntBASIC7.13□□□□□ -1.27
NXF3Q9H4D5 AL683826.1-201ENST00000624104 627 ntBASIC7.13□□□□□ -1.27
NXF3Q9H4D5 AC111152.1-202ENST00000635848 339 ntBASIC7.13□□□□□ -1.27
NXF3Q9H4D5 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 AC010325.3-201ENST00000641084 394 ntBASIC7.13□□□□□ -1.27
NXF3Q9H4D5 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 ZNF840P-201ENST00000504759 1996 ntBASIC7.13□□□□□ -1.27
NXF3Q9H4D5 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.13□□□□□ -1.27
NXF3Q9H4D5 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NXF3Q9H4D5 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NXF3Q9H4D5 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NXF3Q9H4D5 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NXF3Q9H4D5 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NXF3Q9H4D5 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
NXF3Q9H4D5 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NXF3Q9H4D5 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
NXF3Q9H4D5 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NXF3Q9H4D5 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
NXF3Q9H4D5 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.12□□□□□ -1.27
NXF3Q9H4D5 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
NXF3Q9H4D5 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NXF3Q9H4D5 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NXF3Q9H4D5 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.12□□□□□ -1.27
NXF3Q9H4D5 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.12□□□□□ -1.27
NXF3Q9H4D5 RPS27P20-201ENST00000492051 246 ntBASIC7.12□□□□□ -1.27
NXF3Q9H4D5 H3F3AP3-201ENST00000497682 407 ntBASIC7.12□□□□□ -1.27
NXF3Q9H4D5 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.12□□□□□ -1.27
NXF3Q9H4D5 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC7.12□□□□□ -1.27
NXF3Q9H4D5 AC095057.1-201ENST00000507583 168 ntBASIC7.12□□□□□ -1.27
NXF3Q9H4D5 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NXF3Q9H4D5 AC106800.2-201ENST00000514009 1103 ntBASIC7.12□□□□□ -1.27
NXF3Q9H4D5 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC7.12□□□□□ -1.27
NXF3Q9H4D5 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC7.12□□□□□ -1.27
NXF3Q9H4D5 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC7.12□□□□□ -1.27
NXF3Q9H4D5 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC7.12□□□□□ -1.27
NXF3Q9H4D5 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.12□□□□□ -1.27
NXF3Q9H4D5 AL162632.2-201ENST00000553933 399 ntBASIC7.12□□□□□ -1.27
NXF3Q9H4D5 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC7.12□□□□□ -1.27
NXF3Q9H4D5 MIR3154-201ENST00000577829 84 ntBASIC7.12□□□□□ -1.27
NXF3Q9H4D5 RN7SL208P-201ENST00000577964 296 ntBASIC7.12□□□□□ -1.27
NXF3Q9H4D5 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC7.12□□□□□ -1.27
NXF3Q9H4D5 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC7.12□□□□□ -1.27
NXF3Q9H4D5 TEX41-271ENST00000628213 993 ntTSL 5 BASIC7.12□□□□□ -1.27
NXF3Q9H4D5 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC7.12□□□□□ -1.27
NXF3Q9H4D5 AL121936.2-201ENST00000641935 662 ntBASIC7.12□□□□□ -1.27
NXF3Q9H4D5 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.12□□□□□ -1.27
NXF3Q9H4D5 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms